RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 KCNQ1P51787 676 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 UCP3P55916 312 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ITGA1P56199 1179 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 MYO1EQ12965 1108 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 SMAD4Q13485 552 aaKnown RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 TNFAIP1Q13829 316 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 SLC29A2Q14542 456 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 IRF3Q14653 427 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 TAF7Q15545 349 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 SLC5A9Q2M3M2 681 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF568Q3ZCX4 644 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 GALNTL6Q49A17 601 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF484Q5JVG2 852 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 XP32Q5T750 250 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 MEX3CQ5U5Q3 659 aaKnown RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 KANK2Q63ZY3 851 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ADALQ6DHV7 355 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 PLAG1Q6DJT9 500 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 CYP20A1Q6UW02 462 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 KDELC1Q6UW63 502 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 CRELD2Q6UXH1 353 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 USP51Q70EK9 711 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 STK32CQ86UX6 486 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 PROSER1Q86XN7 944 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 RASGRP3Q8IV61 690 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 LINC00346Q8IVM7 164 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 RPTORQ8N122 1335 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 PQLC1Q8N2U9 271 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 TDRD5Q8NAT2 981 aaKnown RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 USP38Q8NB14 1042 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 KYQ8NBH2 561 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 FBXO18Q8NFZ0 1043 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 LINS1Q8NG48 757 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 OR6J1Q8NGC5 347 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 SCFD2Q8WU76 684 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 DEPDC1BQ8WUY9 529 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF480Q8WV37 535 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF606Q8WXB4 792 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 RAPGEF4Q8WZA2 1011 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 GCDHQ92947 438 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 GFM2Q969S9 779 aaKnown RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZBTB8AQ96BR9 441 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 PPP1R13BQ96KQ4 1090 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 GBP5Q96PP8 586 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 DIRC2Q96SL1 478 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 CITED2Q99967 270 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 SOX7Q9BT81 388 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 RANBP17Q9H2T7 1088 aaKnown RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 TTYH1Q9H313 450 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ST6GALNAC4Q9H4F1 302 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 THAP9Q9H5L6 903 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 NSUN3Q9H649 340 aaKnown RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF552Q9H707 407 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 L2HGDHQ9H9P8 463 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 SNX15Q9NRS6 342 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 RXFP3Q9NSD7 469 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 PLA2G3Q9NZ20 509 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 CNOT7Q9UIV1 285 aaKnown RBP4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 ANAPC5Q9UJX4 755 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 CCL27Q9Y4X3 112 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 TRIM17Q9Y577 477 aa4.59□□□□□ -1.67
HMGB1P21-201ENST00000502313 BRWD3Q6RI45 1802 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 KDM3AQ9Y4C1 1321 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 H7C4K7 107 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 TP73O15350 636 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 TXNL1O43396 289 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 PROM1O43490 865 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 PPFIA2O75334 1257 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SEC24DO94855 1032 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 UNC5CO95185 931 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 PDE8BO95263 885 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 DLDP09622 509 aaKnown RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SBK3P0C264 359 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SERPINA4P29622 427 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 GRK5P34947 590 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 PPARGP37231 505 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 MAGEA10P43363 369 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC11A2P49281 568 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC12A3P55017 1021 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 NCKAP1LP55160 1127 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 YWHAHQ04917 246 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 CD69Q07108 199 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 NSUN2Q08J23 767 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 PTP4A2Q12974 167 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 CAMK2DQ13557 499 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 CAMK1Q14012 370 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 HABP2Q14520 560 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 KCNAB1Q14722 419 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SF3B3Q15393 1217 aaKnown RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 STILQ15468 1287 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 LRRC24Q50LG9 513 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 TCP11X2Q5H9J9 407 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 ERMARDQ5T6L9 678 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAXCQ5TGI0 409 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 KRT40Q6A162 431 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 C11orf88Q6PI97 169 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 INO80CQ6PI98 192 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 TRAT1Q6PIZ9 186 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC30A9Q6PML9 568 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 USP17L6PQ6QN14 398 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms