RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 TRIM5Q9C035 493 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 CIPCQ9C0C6 399 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 TKTL2Q9H0I9 626 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 SIK2Q9H0K1 926 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 ZDHHC4Q9NPG8 344 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 ABCB8Q9NUT2 735 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 POLR3BQ9NW08 1133 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-234ENST00000497758 ZNHIT6Q9NWK9 470 aaKnown RBP12.15□□□□□ -0.46
MRPL55-234ENST00000497758 TAS2R14Q9NYV8 317 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 CLEC4EQ9ULY5 219 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 STARD13Q9Y3M8 1113 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 KIAA1549LQ6ZVL6 1849 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 FRYLO94915 3013 aa12.15□□□□□ -0.46
MRPL55-234ENST00000497758 ANTXRLA6NF34 631 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 C2CD4BA6NLJ0 364 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 H0Y626 953 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 SGK1O00141 431 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 TIMM44O43615 452 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 PAGE1O75459 146 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 GJB6O95452 261 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 ADCY5O95622 1261 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 FTLP02792 175 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 PABPC1P11940 636 aaKnown RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 GZMAP12544 262 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 GPD1P21695 349 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 RRM1P23921 792 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 NTSR1P30989 418 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 HOXA6P31267 233 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 RFC1P35251 1148 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 PXNP49023 591 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 FNTBP49356 437 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 AUHQ13825 339 aaKnown RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 CRY1Q16526 586 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 GEN1Q17RS7 908 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 ACBD5Q5T8D3 534 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 EGFLAMQ63HQ2 1017 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 TRNP1Q6NT89 227 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 LONP2Q86WA8 852 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 FAM131BQ86XD5 332 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 VSTM4Q8IW00 320 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 AHI1Q8N157 1196 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 JOSD2Q8TAC2 188 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 NKD2Q969F2 451 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 TRIM11Q96F44 468 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 RPRD1AQ96P16 312 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 MCEEQ96PE7 176 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 SEMA4AQ9H3S1 761 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 POLMQ9NP87 494 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-234ENST00000497758 PARVAQ9NVD7 372 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 ARHGEF38Q9NXL2 777 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 CALCOCO1Q9P1Z2 691 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 VANGL2Q9ULK5 521 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 HS3ST4Q9Y661 456 aa12.14□□□□□ -0.47
MRPL55-234ENST00000497758 DDX3XO00571 662 aaKnown RBP eCLIP12.13□□□□□ -0.472e-9■■□□□ 11.5
MRPL55-234ENST00000497758 NPC1O15118 1278 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 RTN2O75298 545 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 LUC7L3O95232 432 aaKnown RBP12.13□□□□□ -0.47
MRPL55-234ENST00000497758 MYBL1P10243 752 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 HOXB2P14652 356 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 POLR2EP19388 210 aaKnown RBP12.13□□□□□ -0.47
MRPL55-234ENST00000497758 HLA-FP30511 346 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 WASP42768 502 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 PTPN9P43378 593 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
MRPL55-234ENST00000497758 DMWDQ09019 674 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 STARD3Q14849 445 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 C15orf59Q2T9L4 293 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ARL13BQ3SXY8 428 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 CCDC14Q49A88 953 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 HGSNATQ68CP4 663 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 RNF43Q68DV7 783 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ANO7Q6IWH7 933 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 FBXL22Q6P050 247 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 WDR59Q6PJI9 974 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 LRRC31Q6UY01 552 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 CHST9Q7L1S5 443 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ZBTB44Q8NCP5 570 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 OR8K1Q8NGG5 319 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 FIBINQ8TAL6 211 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 FAM172AQ8WUF8 416 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 NELL1Q92832 810 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ZNF653Q96CK0 615 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 MYEOVQ96EZ4 313 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 PRMT1Q99873 361 aaKnown RBP12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ANP32EQ9BTT0 268 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ADAM33Q9BZ11 813 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ELOVL2Q9NXB9 296 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 CACNA2D2Q9NY47 1150 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.47
MRPL55-234ENST00000497758 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
MRPL55-234ENST00000497758 CCDC163A0A0D9SF12 145 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 A0A1B0GVM2 712 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 TCRBV21S2A2A0A5A6 115 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms