RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 WBP2Q969T9 261 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 GOLPH3Q9H4A6 298 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 DHX35Q9H5Z1 703 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 CATSPERBQ9H7T0 1116 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 PCDH18Q9HCL0 1135 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 SPHK2Q9NRA0 654 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 DUS2Q9NX74 493 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 STIM2Q9P246 746 aa20.39■□□□□ 0.85
SCAMP3-209ENST00000497470 CXorf51AA0A1B0GTR3 108 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 C3orf70A6NLC5 250 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 E9PAM4 449 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 HOXC11O43248 304 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 LRIG2O94898 1065 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 MOCS2O96007 188 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 PENKP01210 267 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 IRF1P10914 325 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 IL9P15248 144 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 CDH6P55285 790 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 TFF2Q03403 129 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 ZP2Q05996 745 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 TXNRD3NBQ6F5E7 133 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 FBXL22Q6P050 247 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 CHSY1Q86X52 802 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 LZTR1Q8N653 840 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 HJURPQ8NCD3 748 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 TBC1D31Q96DN5 1066 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 TMA16Q96EY4 203 aaKnown RBP20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 MSANTD3Q96H12 275 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 PBKQ96KB5 322 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 ASB2Q96Q27 587 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 ZYG11BQ9C0D3 744 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 KCNK12Q9HB15 430 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 XPO7Q9UIA9 1087 aaKnown RBP20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 NUMBLQ9Y6R0 609 aa20.38■□□□□ 0.85
SCAMP3-209ENST00000497470 A0A1B0GVM2 712 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 CTAGE9A4FU28 777 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 TCAF2A6NFQ2 919 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 ARNTLO00327 626 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 CLDN11O75508 207 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 ADH1CP00326 375 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 BMP1P13497 986 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 GLULP15104 373 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 ZFXP17010 805 aaPredicted RBP20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 RHOQP17081 205 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 TCP1P17987 556 aaKnown RBP20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 IL4RP24394 825 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 EIF2DP41214 584 aaKnown RBP20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 CDH4P55283 916 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 DPYSL3Q14195 570 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 ODF2Q5BJF6 829 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 TFDP3Q5H9I0 405 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 KCNT1Q5JUK3 1230 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 DAB2IPQ5VWQ8 1189 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 C1orf228Q6PIY5 440 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 CPNE8Q86YQ8 564 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 SLC44A3Q8N4M1 653 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 ALG3Q92685 438 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 KRT35Q92764 455 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 RPGRIP1Q96KN7 1286 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 SIK2Q9H0K1 926 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 RNF14Q9UBS8 474 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 TTC7AQ9ULT0 858 aaPredicted RBP20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 HYOU1Q9Y4L1 999 aa20.37■□□□□ 0.85
SCAMP3-209ENST00000497470 SLC6A4P31645 630 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 CDKN2BP42772 138 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 MAPKAPK2P49137 400 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 AMPD2Q01433 879 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 PFKPQ01813 784 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 GAD2Q05329 585 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 TFDP2Q14188 446 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 KRT81Q14533 505 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 CA9Q16790 459 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 SMTNL2Q2TAL5 461 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 RAP1GAP2Q684P5 730 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 ZNF783Q6ZMS7 281 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 RFX8Q6ZV50 586 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 CPA6Q8N4T0 437 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 RAPGEF5Q92565 580 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 HSPH1Q92598 858 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 KCTD15Q96SI1 283 aaPredicted RBP20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 PLA2G2FQ9BZM2 168 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 SLC2A4RGQ9NR83 387 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 TMEM248Q9NWD8 314 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 CWC15Q9P013 229 aaKnown RBP20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 FBXO10Q9UK96 956 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 NEU3Q9UQ49 428 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 RAD54BQ9Y620 910 aa20.36■□□□□ 0.85
SCAMP3-209ENST00000497470 LRRD1A4D1F6 860 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 EEF2KO00418 725 aaKnown RBP20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 KRT1P04264 644 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 TPI1P60174 286 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 SLC12A1Q13621 1099 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 TUBB2AQ13885 445 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 DPYSQ14117 519 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 DHCR24Q15392 516 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 PREPLQ4J6C6 727 aaPredicted RBP20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 ATP13A4Q4VNC1 1196 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 RHBDF2Q6PJF5 856 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms