RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	TPR	P12270	2363 aa	Known RBP	5.85	□□□□□ -1.47
UBE3C-208	ENST00000497368	DMXL2	Q8TDJ6	3036 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	CACNA1B	Q00975	2339 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	TRAV19	A0A0A6YYK7	116 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PVALEF	A0A1B0GWK0	134 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PRAMEF27	A3QJZ7	478 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	SLC30A4	O14863	429 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	NCAM2	O15394	837 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	ASS1	P00966	412 aa	Known RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	TNNC2	P02585	160 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	CKM	P06732	381 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	RET	P07949	1114 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PTPN1	P18031	435 aa	Known RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PCSK1	P29120	753 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	AVPR1A	P37288	418 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	KIR2DL1	P43626	348 aa	Predicted RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	LHX1	P48742	406 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	NDUFA8	P51970	172 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	SLC5A3	P53794	718 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	RPL10A	P62906	217 aa	Known RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	INCA1	Q0VD86	236 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	TAF10	Q12962	218 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	SIM2	Q14190	667 aa	Predicted RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PDGFRL	Q15198	375 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	CSRP2	Q16527	193 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PLK5	Q496M5	336 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	VSTM1	Q6UX27	236 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	DENND5B	Q6ZUT9	1274 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	DGLUCY	Q7Z3D6	616 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	FILIP1	Q7Z7B0	1213 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	RASSF3	Q86WH2	238 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	SPATA2L	Q8IUW3	424 aa	Predicted RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	ZC3H3	Q8IXZ2	948 aa	Known RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	SYNPO	Q8N3V7	929 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	UBR7	Q8N806	425 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	IQUB	Q8NA54	791 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	RPLP0P6	Q8NHW5	317 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	OLIG1	Q8TAK6	271 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	USP33	Q8TEY7	942 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	CACTIN	Q8WUQ7	758 aa	Known RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	ATRIP	Q8WXE1	791 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	MRPS31	Q92665	395 aa	Known RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	SEMA4D	Q92854	862 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PLPPR2	Q96GM1	343 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	PSMG3-AS1	Q96PY0	264 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	GCNA	Q96QF7	691 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	ELOVL4	Q9GZR5	314 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	CCSER2	Q9H7U1	834 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	MAGEF1	Q9HAY2	307 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	NMUR1	Q9HB89	426 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	CSNK1G1	Q9HCP0	422 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	DUS2	Q9NX74	493 aa	Known RBP	5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	GMIP	Q9P107	970 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	LOC400499	M0QZD8	3231 aa		5.84	□□□□□ -1.47
UBE3C-208	ENST00000497368	NBEA	Q8NFP9	2946 aa		5.84	□□□□□ -1.48
UBE3C-208	ENST00000497368	PLXNB3	Q9ULL4	1909 aa		5.84	□□□□□ -1.48
UBE3C-208	ENST00000497368	CACNA1E	Q15878	2313 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	NUMA1	Q14980	2115 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	CCDC163	A0A0D9SF12	145 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	SGK1	O00141	431 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	MDM4	O15151	490 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	COCH	O43405	550 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	LRP3	O75074	770 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	AKAP3	O75969	853 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	HLA-DRA	P01903	254 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	NR3C1	P04150	777 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	PRNP	P04156	253 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	ADRB1	P08588	477 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	LIG3	P49916	1009 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	SNRPF	P62306	86 aa	Known RBP	5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	LMNB2	Q03252	620 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	DMC1	Q14565	340 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	DHCR24	Q15392	516 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	SURF1	Q15526	300 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	NFIL3	Q16649	462 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	KNOP1	Q1ED39	458 aa	Known RBP	5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	ZNF699	Q32M78	642 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	WDR72	Q3MJ13	1102 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	SNX30	Q5VWJ9	437 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	C1orf228	Q6PIY5	440 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	RHBDF2	Q6PJF5	856 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	C4orf50	Q6ZRC1	276 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	PRR23B	Q6ZRT6	265 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	CLEC20A	Q6ZU45	233 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	SYT13	Q7L8C5	426 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	SCD5	Q86SK9	330 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	BBS7	Q8IWZ6	715 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	PLD6	Q8N2A8	252 aa	Known RBP	5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	C12orf29	Q8N999	325 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	MDGA1	Q8NFP4	955 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	TAS1R2	Q8TE23	839 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	CD101	Q93033	1021 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	ZC3H10	Q96K80	434 aa	Known RBP	5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	ZNF396	Q96N95	335 aa	Predicted RBP	5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	P2RY13	Q9BPV8	354 aa		5.83	□□□□□ -1.48
UBE3C-208	ENST00000497368	TPSD1	Q9BZJ3	242 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms