RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 E9PAM4 449 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 NEDD8-MDP1E9PL57 170 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 GFRA2O00451 464 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 FTCDO95954 541 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 RARAP10276 462 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 SGSHP51688 502 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 NRG1Q02297 640 aaPredicted RBP18.95■□□□□ 0.62
TSSC4-210ENST00000496468 NR1H3Q13133 447 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 KRT81Q14533 505 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 DPYSL2Q16555 572 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 CA9Q16790 459 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 ITPRIPL2Q3MIP1 535 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 MPPE1Q53F39 396 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 LRRC38Q5VT99 294 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 PEX26Q7Z412 305 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 PYROXD2Q8N2H3 581 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 TRIM58Q8NG06 486 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 DDI1Q8WTU0 396 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 BHMTQ93088 406 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 UHRF1Q96T88 793 aaPredicted RBP18.95■□□□□ 0.62
TSSC4-210ENST00000496468 BBS2Q9BXC9 721 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 IRX2Q9BZI1 471 aaPredicted RBP18.95■□□□□ 0.62
TSSC4-210ENST00000496468 SLC2A4RGQ9NR83 387 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 KLHL11Q9NVR0 708 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 GTSE1Q9NYZ3 720 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 MARK1Q9P0L2 795 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 OR12D3Q9UGF7 316 aa18.95■□□□□ 0.62
TSSC4-210ENST00000496468 HOXC11O43248 304 aaPredicted RBP18.94■□□□□ 0.62
TSSC4-210ENST00000496468 CREB3O43889 395 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 KRT1P04264 644 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 L1CAMP32004 1257 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 MLLT6P55198 1093 aaPredicted RBP18.94■□□□□ 0.62
TSSC4-210ENST00000496468 TPI1P60174 286 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 GAD2Q05329 585 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 PPP6R3Q5H9R7 873 aaPredicted RBP18.94■□□□□ 0.62
TSSC4-210ENST00000496468 MANEALQ5VSG8 457 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 FYB2Q5VWT5 728 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 FBXL22Q6P050 247 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 C14orf80Q86SX3 495 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 NT5DC3Q86UY8 548 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 TMEM25Q86YD3 366 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 ADGRG2Q8IZP9 1017 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 TTC8Q8TAM2 541 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 TBC1D31Q96DN5 1066 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 MYEOVQ96EZ4 313 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 KCTD15Q96SI1 283 aaPredicted RBP18.94■□□□□ 0.62
TSSC4-210ENST00000496468 TRPV5Q9NQA5 729 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 AMFRQ9UKV5 643 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.94■□□□□ 0.62
TSSC4-210ENST00000496468 KIAA1549LQ6ZVL6 1849 aa18.94■□□□□ 0.62
TSSC4-210ENST00000496468 FAM72CH0Y354 149 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 KIF5CO60282 957 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 TBL1XO60907 577 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 SRGAP2O75044 1071 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 LRIG2O94898 1065 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 PENKP01210 267 aaPredicted RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 TYRP14679 529 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 HOXD9P28356 352 aaPredicted RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 HTR7P34969 479 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 CTNNA1P35221 906 aaKnown RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 ZNF135P52742 658 aaPredicted RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 CDH6P55285 790 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 RPS24P62847 133 aaKnown RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 SEMA3BQ13214 749 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 ODF2Q5BJF6 829 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 FAM72AQ5TYM5 149 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 FAM72DQ6L9T8 149 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 RWDD4Q6NW29 188 aaKnown RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 RHBDF2Q6PJF5 856 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 FAM72BQ86X60 149 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 CIR1Q86X95 450 aaPredicted RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 ZNF683Q8IZ20 524 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 CD101Q93033 1021 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 TMA16Q96EY4 203 aaKnown RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 KCND1Q9NSA2 647 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 DDX56Q9NY93 547 aaKnown RBP18.93■□□□□ 0.62
TSSC4-210ENST00000496468 MUTYHQ9UIF7 546 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 NEU3Q9UQ49 428 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 ZKSCAN5Q9Y2L8 839 aa18.93■□□□□ 0.62
TSSC4-210ENST00000496468 IGLV3-10A0A075B6K4 115 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 A0A1B0GVM2 712 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 CCDC66A2RUB6 948 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 TCAF2A6NFQ2 919 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 OTOL1A6NHN0 477 aaPredicted RBP18.92■□□□□ 0.62
TSSC4-210ENST00000496468 MIF4GDA9UHW6 222 aaKnown RBP18.92■□□□□ 0.62
TSSC4-210ENST00000496468 H3BRJ5 948 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 EEF2KO00418 725 aaKnown RBP18.92■□□□□ 0.62
TSSC4-210ENST00000496468 MSNP26038 577 aaKnown RBP18.92■□□□□ 0.62
TSSC4-210ENST00000496468 CTNNA2P26232 953 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 ARL4AP40617 200 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 MARCKSL1P49006 195 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 MPP7Q5T2T1 576 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 UBALD2Q8IYN6 164 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 CFAP52Q8N1V2 620 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
TSSC4-210ENST00000496468 KRT35Q92764 455 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 IGSF8Q969P0 613 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 MAGEB5Q9BZ81 275 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 ZYG11BQ9C0D3 744 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 PCDH18Q9HCL0 1135 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms