RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 NOX5Q96PH1 765 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 TUBGCP2Q9BSJ2 902 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 NUP62CLQ9H1M0 184 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 TMEM245Q9H330 911 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 CD93Q9NPY3 652 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRF-214ENST00000496043 SUSD2Q9UGT4 822 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
PTPRF-214ENST00000496043 SPTBN2O15020 2390 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 KCNJ18B7U540 433 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 MOCS2O96007 188 aaPredicted RBP13.21□□□□□ -0.29
PTPRF-214ENST00000496043 SLC2A3P11169 496 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 CEACAM1P13688 526 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 CD70P32970 193 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
PTPRF-214ENST00000496043 MAPK8P45983 427 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 NOVA1P51513 510 aaKnown RBP13.21□□□□□ -0.29
PTPRF-214ENST00000496043 ST8SIA6P61647 398 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 RPS24P62847 133 aaKnown RBP13.21□□□□□ -0.29
PTPRF-214ENST00000496043 DPCR1Q3MIW9 517 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 DCAF6Q58WW2 860 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 PSAPL1Q6NUJ1 521 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 TAC4Q86UU9 113 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 CARNMT1Q8N4J0 409 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 WFDC5Q8TCV5 224 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 RNF34Q969K3 372 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 TTC17Q96AE7 1141 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 BTN2A3PQ96KV6 586 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 CNTNAP3BQ96NU0 1288 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.29
PTPRF-214ENST00000496043 GPR174Q9BXC1 333 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 CNTNAP3Q9BZ76 1288 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 SLC32A1Q9H598 525 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 FBRSQ9HAH7 460 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 CAPN10Q9HC96 672 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 SIX2Q9NPC8 291 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 ASNSD1Q9NWL6 643 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 TJP2Q9UDY2 1190 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 NUP205Q92621 2012 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 NCOR2Q9Y618 2525 aa13.21□□□□□ -0.29
PTPRF-214ENST00000496043 METTL12A8MUP2 240 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 MEI4A8MW99 385 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 H0Y626 953 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
PTPRF-214ENST00000496043 MOCS3O95396 460 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 IGLV3-19P01714 112 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 ASLP04424 464 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 ABCB4P21439 1286 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 TACR2P21452 398 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 MAOBP27338 520 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 CLCN1P35523 988 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 ZBTB16Q05516 673 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 TAF5Q15542 800 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 PTPRNQ16849 979 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 OR6B2Q6IFH4 312 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 CLEC17AQ6ZS10 378 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
PTPRF-214ENST00000496043 PASD1Q8IV76 773 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 FAM71AQ8IYT1 594 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 LGI2Q8N0V4 545 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 CFAP52Q8N1V2 620 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 HDDC3Q8N4P3 179 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 LMLNQ96KR4 655 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 CPXM1Q96SM3 734 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 NUCKS1Q9H1E3 243 aaKnown RBP13.2□□□□□ -0.3
PTPRF-214ENST00000496043 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 PRSS16Q9NQE7 514 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 KIAA1522Q9P206 1035 aaPredicted RBP13.2□□□□□ -0.3
PTPRF-214ENST00000496043 ANGPTL2Q9UKU9 493 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 NFE2L3Q9Y4A8 694 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 CEP83Q9Y592 693 aa13.2□□□□□ -0.3
PTPRF-214ENST00000496043 KCNU1A8MYU2 1149 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 GIPC1O14908 333 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 OPHN1O60890 802 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 HSF2BPO75031 334 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 IGLV3-25P01717 112 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 DNTTP04053 509 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 C7P10643 843 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 PMLP29590 882 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 CCR1P32246 355 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 MTA1Q13330 715 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 EIF4EBP2Q13542 120 aaPredicted RBP13.19□□□□□ -0.3
PTPRF-214ENST00000496043 CDH18Q13634 790 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
PTPRF-214ENST00000496043 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 MIIPQ5JXC2 388 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 KLHDC7AQ5VTJ3 777 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 DCAF12L1Q5VU92 463 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 RAP1GAP2Q684P5 730 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 FAM124AQ86V42 546 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 SLC47A2Q86VL8 602 aa13.19□□□□□ -0.3
PTPRF-214ENST00000496043 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms