RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ASB3Q9Y575 518 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 USP3Q9Y6I4 520 aa13.39□□□□□ -0.27
PTPN7-217ENST00000495688 A0A0G2JLL6 359 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-217ENST00000495688 DGKIO75912 1065 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 STAU1O95793 577 aaKnown RBP13.38□□□□□ -0.27
PTPN7-217ENST00000495688 CD1EP15812 388 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 NR2C2P49116 596 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 STEAP4Q687X5 459 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 RAPH1Q70E73 1250 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 SLC26A9Q7LBE3 791 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 PRRT2Q7Z6L0 340 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-217ENST00000495688 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-217ENST00000495688 CCNYQ8ND76 341 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 HIPK4Q8NE63 616 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 VCXQ9H320 206 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 MAN1C1Q9NR34 630 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 NDE1Q9NXR1 346 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 ANGPTL2Q9UKU9 493 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
PTPN7-217ENST00000495688 SLC25A27O95847 323 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 PROCP04070 461 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 IDH3AP50213 366 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 AP2B1P63010 937 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 ITGA9Q13797 1035 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 C6orf163Q5TEZ5 329 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 MTHFD1LQ6UB35 978 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 ARMCX2Q7L311 632 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 AGR3Q8TD06 166 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 FAM149B1Q96BN6 582 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 PGBD4Q96DM1 585 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 AGAP3Q96P47 875 aa13.38□□□□□ -0.27
PTPN7-217ENST00000495688 KCNK1O00180 336 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 PPP1R12AO14974 1030 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 GLRA3O75311 464 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 GNAT1P11488 350 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 DESP17661 470 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 AKAP5P24588 427 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 IRX1P78414 480 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 CDC16Q13042 620 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 USP4Q13107 963 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 HIC1Q14526 733 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 C4orf22Q6V702 233 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 PLD6Q8N2A8 252 aaKnown RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 PHTF2Q8N3S3 785 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 SLC2A14Q8TDB8 520 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 C1orf21Q9H246 121 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 PPP2R3BQ9Y5P8 575 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 SPTLC1O15269 473 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 CREB3O43889 395 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 SETSIPP0DME0 302 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 ZFXP17010 805 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 NCF2P19878 526 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 TYK2P29597 1187 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 HOXA11P31270 313 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 GRM5P41594 1212 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 PGGT1BP53609 377 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 SARNPP82979 210 aaKnown RBP13.37□□□□□ -0.27
PTPN7-217ENST00000495688 CDK18Q07002 472 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 LRRC8BQ6P9F7 803 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 KBTBD7Q8WVZ9 684 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 CDKL2Q92772 493 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 PRDM12Q9H4Q4 367 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 OTOFQ9HC10 1997 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 COPG2Q9UBF2 871 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 RPS6KL1Q9Y6S9 549 aa13.37□□□□□ -0.27
PTPN7-217ENST00000495688 ZNF487B1APH4 448 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ZNF195O14628 629 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 SERPINE1P05121 402 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 CNTFP26441 200 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ARL4AP40617 200 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ADCYAP1R1P41586 468 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 RABGGTBP53611 331 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 DSG1Q02413 1049 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 BST2Q10589 180 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 DLG2Q15700 870 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 DCAF6Q58WW2 860 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 MARCH8Q5T0T0 291 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 POTEAQ6S8J7 498 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 MAMDC4Q6UXC1 1216 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 RASSF3Q86WH2 238 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ZNF567Q8N184 647 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 NME8Q8N427 588 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TTC39CQ8N584 583 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 SLC26A7Q8TE54 656 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TUBGCP5Q96RT8 1024 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ECSITQ9BQ95 431 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 NXF3Q9H4D5 531 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 SPATS2LQ9NUQ6 558 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 KLK14Q9P0G3 267 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms