RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 OSGEPQ9NPF4 335 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 DNAJC17Q9NVM6 304 aaKnown RBP17.68■□□□□ 0.42
HDAC6-235ENST00000495515 PLK2Q9NYY3 685 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 VANGL2Q9ULK5 521 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 USP18Q9UMW8 372 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 TULP3O75386 442 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 LRCH4O75427 683 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 DRD1P21728 446 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 MAN1A1P33908 653 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 OPRD1P41143 372 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 SSR1P43307 286 aaKnown RBP17.67■□□□□ 0.42
HDAC6-235ENST00000495515 GALK1P51570 392 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 HADHBP55084 474 aaKnown RBP17.67■□□□□ 0.42
HDAC6-235ENST00000495515 NRG1Q02297 640 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-235ENST00000495515 LRRC32Q14392 662 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 UBXN2BQ14CS0 331 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 PON2Q15165 354 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 GAB4Q2WGN9 574 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 RAB6CQ53S08 254 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 BOLA3Q53S33 107 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 TMEM31Q5JXX7 168 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 GRAMD4Q6IC98 578 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 TXNDC11Q6PKC3 985 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 ETFBKMTQ8IXQ9 262 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 CCDC185Q8N715 623 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 PBXIP1Q96AQ6 731 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 PRICKLE1Q96MT3 831 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-235ENST00000495515 RAB6CQ9H0N0 254 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 ANLNQ9NQW6 1124 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 ARHGEF4Q9NR80 690 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 STIM2Q9P246 746 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 OR12D3Q9UGF7 316 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 PCSK1NQ9UHG2 260 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 RAPGEFL1Q9UHV5 662 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 FZD10Q9ULW2 581 aa17.67■□□□□ 0.42
HDAC6-235ENST00000495515 FAM170BA6NMN3 283 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 BTNL10A8MVZ5 291 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 PJA2O43164 708 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 APODP05090 189 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 CD72P21854 359 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 HOXD9P28356 352 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-235ENST00000495515 GRIA2P42262 883 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 DGKGP49619 791 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 NAP1L1P55209 391 aaKnown RBP17.66■□□□□ 0.42
HDAC6-235ENST00000495515 RPS24P62847 133 aaKnown RBP17.66■□□□□ 0.42
HDAC6-235ENST00000495515 CCDC173Q0VFZ6 552 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 MESDQ14696 234 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 TMEM196Q5HYL7 178 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 DGKKQ5KSL6 1271 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 ERMARDQ5T6L9 678 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 BMP8AQ7Z5Y6 402 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 MFN1Q8IWA4 741 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 CHFRQ96EP1 664 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 DESI2Q9BSY9 194 aa17.66■□□□□ 0.42
HDAC6-235ENST00000495515 NDRG2Q9UN36 371 aaKnown RBP17.66■□□□□ 0.42
HDAC6-235ENST00000495515 REXO2Q9Y3B8 237 aaKnown RBP17.66■□□□□ 0.42
HDAC6-235ENST00000495515 A0A1B0GVM2 712 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 FAM86C2PA6NEL3 165 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 TCAF2A6NFQ2 919 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 TMEM110-MUSTN1A8MSY1 372 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 E9PAM4 449 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 H0Y626 953 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 I6L893 689 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-235ENST00000495515 SRGAP2O75044 1071 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 CLDN11O75508 207 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 KAT7O95251 611 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 L1CAMP32004 1257 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 SLC1A1P43005 524 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 SLC6A11P48066 632 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 ZNF135P52742 658 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-235ENST00000495515 OXCT1P55809 520 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 CCZ1BP86790 482 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 CCZ1P86791 482 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-235ENST00000495515 CDH18Q13634 790 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 IFI16Q16666 785 aaKnown RBP17.65■□□□□ 0.42
HDAC6-235ENST00000495515 C5orf22Q49AR2 442 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 FBXO43Q4G163 708 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 CHST9Q7L1S5 443 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 C12orf40Q86WS4 652 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 CFAP52Q8N1V2 620 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 SYNPOQ8N3V7 929 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 ARFGAP1Q8N6T3 406 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 PPP1R9BQ96SB3 815 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 EPAS1Q99814 870 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 LRFN3Q9BTN0 628 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 TSGA10Q9BZW7 698 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 RETREG1Q9H6L5 497 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 TMPRSS4Q9NRS4 437 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 PPARGC1AQ9UBK2 798 aaKnown RBP17.65■□□□□ 0.42
HDAC6-235ENST00000495515 FBXO10Q9UK96 956 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 AP4E1Q9UPM8 1137 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 SLC27A6Q9Y2P4 619 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 SIT1Q9Y3P8 196 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 ADGRG1Q9Y653 693 aa17.65■□□□□ 0.42
HDAC6-235ENST00000495515 TICRRQ7Z2Z1 1910 aa17.64■□□□□ 0.42
HDAC6-235ENST00000495515 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-235ENST00000495515 TBC1D3BA6NDS4 549 aa17.64■□□□□ 0.41
HDAC6-235ENST00000495515 SHISA7A6NL88 538 aa17.64■□□□□ 0.41
HDAC6-235ENST00000495515 DRGXA6NNA5 263 aa17.64■□□□□ 0.41
HDAC6-235ENST00000495515 LUC7L3O95232 432 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms