RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 F8VZ95 297 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 TSPAN3O60637 253 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 HSF2BPO75031 334 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 ZNF806P0C7X5 589 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 CYP11B1P15538 503 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 HLA-FP30511 346 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 SLC6A4P31645 630 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 WASP42768 502 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 SGSHP51688 502 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 TERF1P54274 439 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 ADKP55263 362 aaKnown RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 SNX16P57768 344 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 EIF4EBP2Q13542 120 aaPredicted RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 RSPO4Q2I0M5 234 aaPredicted RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 PTPN20Q4JDL3 420 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 EFHC1Q5JVL4 640 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 PIK3R6Q5UE93 754 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 NADSYN1Q6IA69 706 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 KIAA0907Q7Z7F0 614 aaPredicted RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 HJURPQ8NCD3 748 aaPredicted RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 NETO1Q8TDF5 533 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 SLC2A13Q96QE2 648 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 GANQ9H2C0 597 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 ELOVL2Q9NXB9 296 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 CALCOCO1Q9P1Z2 691 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 CDV3Q9UKY7 258 aaKnown RBP13.69□□□□□ -0.22
ERCC3-209ENST00000494464 STON1Q9Y6Q2 735 aa13.69□□□□□ -0.22
ERCC3-209ENST00000494464 A0A1W2PQJ5 194 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 BCLAF3A2AJT9 711 aaKnown RBP13.68□□□□□ -0.22
ERCC3-209ENST00000494464 TYW5A2RUC4 315 aaKnown RBP13.68□□□□□ -0.22
ERCC3-209ENST00000494464 KIF2AO00139 706 aaPredicted RBP13.68□□□□□ -0.22
ERCC3-209ENST00000494464 ZBTB24O43167 697 aaPredicted RBP13.68□□□□□ -0.22
ERCC3-209ENST00000494464 TIMM44O43615 452 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 APOEP02649 317 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 NDUFV2P19404 249 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 CASP14P31944 242 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 IL12RB1P42701 662 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 FOXK2Q01167 660 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 ZNF234Q14588 700 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 STARD3Q14849 445 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 SPDYCQ5MJ68 293 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 TMEM215Q68D42 235 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 KIAA1211LQ6NV74 962 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 RFWD3Q6PCD5 774 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 NYAP1Q6ZVC0 841 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 SLC26A9Q7LBE3 791 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 ZDHHC17Q8IUH5 632 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 AHI1Q8N157 1196 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 PGBD3Q8N328 593 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 TMEM35BQ8NCS4 154 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 ADAM32Q8TC27 787 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 STK33Q9BYT3 514 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 TTYH3Q9C0H2 523 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 VPS45Q9NRW7 570 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 INVSQ9Y283 1065 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 RAD54BQ9Y620 910 aa13.68□□□□□ -0.22
ERCC3-209ENST00000494464 ZNF217O75362 1048 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 DAB1O75553 588 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 LSM8O95777 96 aaKnown RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 TUBB4AP04350 444 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 ERBB2P04626 1255 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 SCNN1AP37088 669 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 LIMK1P53667 647 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 TAF5Q15542 800 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 DCAF6Q58WW2 860 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 MS4A13Q5J8X5 152 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 C12orf50Q8NA57 414 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 EPS8L1Q8TE68 723 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 RLN3Q8WXF3 142 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 DDX1Q92499 740 aaKnown RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 BTN2A3PQ96KV6 586 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 MRGPRX1Q96LB2 322 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 RTKNQ9BST9 563 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 CIPCQ9C0C6 399 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 NUCKS1Q9H1E3 243 aaKnown RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 ABCB8Q9NUT2 735 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 MBD1Q9UIS9 605 aaPredicted RBP13.67□□□□□ -0.22
ERCC3-209ENST00000494464 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 CAPN11Q9UMQ6 739 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 CACNA1AO00555 2505 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 CEP192Q8TEP8 1941 aa13.67□□□□□ -0.22
ERCC3-209ENST00000494464 ABCA7Q8IZY2 2146 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 GOLGA6L7A0A1B0GV03 622 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 GOLGA6L9A6NEM1 432 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 USP27XA6NNY8 438 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 WASH3PC4AMC7 463 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SLC30A4O14863 429 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms