RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TULP3O75386 442 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 SKAP2O75563 359 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 IL33O95760 270 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 MT-CO3P00414 261 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 AHSGP02765 367 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 FTLP02792 175 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 THP07101 528 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 GRPP07492 148 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 TYRP14679 529 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 ATP6V1B1P15313 513 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 AKAP5P24588 427 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 PRKAR1BP31321 381 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 KRT9P35527 623 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 STAT1P42224 750 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 KCNJ4P48050 445 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 SUMO2P61956 95 aaKnown RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 IRX3P78415 501 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 ID2Q02363 134 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 IFT88Q13099 833 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 IFIT5Q13325 482 aaKnown RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 TMED1Q13445 227 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 E2F5Q15329 346 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 INPP5JQ15735 1006 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 PKN2Q16513 984 aaKnown RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 MGAT5BQ3V5L5 792 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 SLC45A4Q5BKX6 768 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 KHDC1LQ5JSQ8 128 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 GPATCH4Q5T3I0 446 aaKnown RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 DEPDC1Q5TB30 811 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 MFSD4BQ5TF39 518 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 DAB2IPQ5VWQ8 1189 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 TMEM65Q6PI78 240 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 ABRAXAS1Q6UWZ7 409 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 B3GNT9Q6UX72 402 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 DSTYKQ6XUX3 929 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 OTUD6AQ7L8S5 288 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 RASGRP2Q7LDG7 609 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 DPP9Q86TI2 863 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 TEX11Q8IYF3 940 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 IZUMO1Q8IYV9 350 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 CEP57L1Q8IYX8 460 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 MYCT1Q8N699 235 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 MPLKIPQ8TAP9 179 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 OSR1Q8TAX0 266 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 RSPRY1Q96DX4 576 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 ZFYVE19Q96K21 471 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 TAAR9Q96RI9 348 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 TTLL2Q9BWV7 592 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 RANBP17Q9H2T7 1088 aaKnown RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 CNNM1Q9NRU3 951 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 ZBTB40Q9NUA8 1239 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 NFKBIL1Q9UBC1 381 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 XPR1Q9UBH6 696 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 CFDP1Q9UEE9 299 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 RRP7AQ9Y3A4 280 aaKnown RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 A6NNZ2 444 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 B4E171 279 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 H0Y3Z8 333 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 FOXN3O00409 490 aaPredicted RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 PES1O00541 588 aaKnown RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 PQBP1O60828 265 aaKnown RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 OFD1O75665 1012 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 UNC5CO95185 931 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 CD63P08962 238 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 FGF2P09038 288 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 STMN1P16949 149 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 DESP17661 470 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 MUTP22033 750 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 FPR3P25089 353 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 CDC25AP30304 524 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 HPDP32754 393 aaPredicted RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 PPM1AP35813 382 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 ATP6V1E1P36543 226 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 IL6STP40189 918 aaPredicted RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 VIPR2P41587 438 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 COPB1P53618 953 aaKnown RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 PRKAG1P54619 331 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 TPD52P55327 224 aaPredicted RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 UBASH3AP57075 661 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 UBXN2AP68543 259 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 TMF1P82094 1093 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 HMGN5P82970 282 aaKnown RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 E2F1Q01094 437 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 KRT17Q04695 432 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 ICA1Q05084 483 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 EXOSC9Q06265 439 aaKnown RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 PPP2R5CQ13362 524 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 BLMHQ13867 455 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 SPARCL1Q14515 664 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 CYP1B1Q16678 543 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 ARMC4Q5T2S8 1044 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 IFIT1BQ5T764 474 aaKnown RBP2.45□□□□□ -2.02
PTPN12-212ENST00000494248 EMC10Q5UCC4 262 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 VSTM1Q6UX27 236 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 RANBP10Q6VN20 620 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 COLCA1Q6ZS62 124 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 MCM10Q7L590 875 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 KRT74Q7RTS7 529 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 NR2C2APQ86WQ0 139 aa2.45□□□□□ -2.02
PTPN12-212ENST00000494248 PPP1R3BQ86XI6 285 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms