RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 HLA-EP13747 358 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 NDUFV2P19404 249 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 TACR2P21452 398 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 PRKCHP24723 683 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 NOS2P35228 1153 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 FLT3P36888 993 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 MATKP42679 507 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 GABRB2P47870 512 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 ATXN1P54253 815 aaKnown RBP15.23■□□□□ 0.03
ATG4B-224ENST00000494132 SNX16P57768 344 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 EIF4EBP2Q13542 120 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-224ENST00000494132 USP39Q53GS9 565 aaKnown RBP15.23■□□□□ 0.03
ATG4B-224ENST00000494132 SMYD5Q6GMV2 418 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 TRNP1Q6NT89 227 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 ADIPOR2Q86V24 386 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 ZNF677Q86XU0 584 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 ZDHHC17Q8IUH5 632 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 ATP6V0D2Q8N8Y2 350 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 ZNF397Q8NF99 534 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-224ENST00000494132 UCMAQ8WVF2 138 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 GABRG3Q99928 467 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 DDX50Q9BQ39 737 aaKnown RBP15.23■□□□□ 0.03
ATG4B-224ENST00000494132 SLC2A11Q9BYW1 496 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 SMOC1Q9H4F8 434 aa15.23■□□□□ 0.03
ATG4B-224ENST00000494132 METTL5Q9NRN9 209 aaKnown RBP15.23■□□□□ 0.03
ATG4B-224ENST00000494132 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATG4B-224ENST00000494132 TYW5A2RUC4 315 aaKnown RBP15.22■□□□□ 0.03
ATG4B-224ENST00000494132 KCNU1A8MYU2 1149 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 ABCB4P21439 1286 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 TGM1P22735 817 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 IRAK1P51617 712 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 LMAN2Q12907 356 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 FUT11Q495W5 492 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 FSCBQ5H9T9 825 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 MBLAC2Q68D91 279 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 ARMCX6Q7L4S7 300 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 EMC1Q8N766 993 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 OLIG1Q8TAK6 271 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 BTN2A3PQ96KV6 586 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 TBCBQ99426 244 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 NPY6RQ99463 290 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 CD248Q9HCU0 757 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 ANLNQ9NQW6 1124 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 TMPRSS4Q9NRS4 437 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 PIGVQ9NUD9 493 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATG4B-224ENST00000494132 SNX10Q9Y5X0 201 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.22■□□□□ 0.03
ATG4B-224ENST00000494132 ZNF292O60281 2723 aa15.22■□□□□ 0.03
ATG4B-224ENST00000494132 F5H5T6 163 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 PAGE1O75459 146 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 LUC7L3O95232 432 aaKnown RBP15.21■□□□□ 0.03
ATG4B-224ENST00000494132 SERPINC1P01008 464 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 EPHX1P07099 455 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 CCR1P32246 355 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 CENPCQ03188 943 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 CDH18Q13634 790 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 EIF4HQ15056 248 aaKnown RBP15.21■□□□□ 0.03
ATG4B-224ENST00000494132 ELF2Q15723 593 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 ZSCAN23Q3MJ62 389 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 FILIP1LQ4L180 1135 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 FNDC3BQ53EP0 1204 aaKnown RBP15.21■□□□□ 0.03
ATG4B-224ENST00000494132 RAB6CQ53S08 254 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 KIAA1324Q6UXG2 1013 aaKnown RBP15.21■□□□□ 0.03
ATG4B-224ENST00000494132 SERPINA13PQ6UXR4 307 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 AHI1Q8N157 1196 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 DEFB119Q8N690 84 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 MSANTD4Q8NCY6 345 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 CFAP57Q96MR6 1250 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 PRMT1Q99873 361 aaKnown RBP15.21■□□□□ 0.03
ATG4B-224ENST00000494132 SIK2Q9H0K1 926 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 RAB6CQ9H0N0 254 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 SEMA4GQ9NTN9 838 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 MBD1Q9UIS9 605 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-224ENST00000494132 INTS6Q9UL03 887 aaKnown RBP15.21■□□□□ 0.03
ATG4B-224ENST00000494132 VANGL2Q9ULK5 521 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 STAP1Q9ULZ2 295 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 CYP8B1Q9UNU6 501 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.03
ATG4B-224ENST00000494132 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 A0A1B0GTH6 734 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 H0Y626 953 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 I6L893 689 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-224ENST00000494132 EPN2O95208 641 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 ADCY5O95622 1261 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 UNGP13051 313 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-224ENST00000494132 MMP8P22894 467 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 P2RY2P41231 377 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 DHPSP49366 369 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-224ENST00000494132 CREB5Q02930 508 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 DEUP1Q05D60 604 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 STARD3Q14849 445 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 SF3A2Q15428 464 aaKnown RBP15.2■□□□□ 0.02
ATG4B-224ENST00000494132 PTPRNQ16849 979 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 MAP7D1Q3KQU3 841 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 MPP7Q5T2T1 576 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 PMS2CLQ68D20 193 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 RNF43Q68DV7 783 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 FBXL22Q6P050 247 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms