RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PLK2Q9NYY3 685 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 MARK1Q9P0L2 795 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 HYOU1Q9Y4L1 999 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 SNX10Q9Y5X0 201 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 ALG6Q9Y672 507 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 OTOL1A6NHN0 477 aaPredicted RBP15.04■□□□□ -0
BRCA1-223ENST00000494123 TBL1XO60907 577 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 KRT7P08729 469 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 TYRP14679 529 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 TAS2R40P59535 323 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 ODF2Q5BJF6 829 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 TTC39BQ5VTQ0 682 aaPredicted RBP15.04■□□□□ -0
BRCA1-223ENST00000494123 CCDC117Q8IWD4 279 aaPredicted RBP15.04■□□□□ -0
BRCA1-223ENST00000494123 TEKT4Q8WW24 435 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 PRICKLE1Q96MT3 831 aaPredicted RBP15.04■□□□□ -0
BRCA1-223ENST00000494123 ALS2CR12Q96Q35 445 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 XPO6Q96QU8 1125 aaKnown RBP15.04■□□□□ -0
BRCA1-223ENST00000494123 EPAS1Q99814 870 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 C8orf33Q9H7E9 229 aaPredicted RBP15.04■□□□□ -0
BRCA1-223ENST00000494123 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.04■□□□□ -0
BRCA1-223ENST00000494123 STIM2Q9P246 746 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 PYCARDQ9ULZ3 195 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 PIAS3Q9Y6X2 628 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 COL4A2P08572 1712 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 MYOFQ9NZM1 2061 aa15.04■□□□□ -0
BRCA1-223ENST00000494123 GRID2IPA4D2P6 1211 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 E9PAM4 449 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 HOXC11O43248 304 aaPredicted RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 CREB3O43889 395 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 PALMO75781 387 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 RARAP10276 462 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 GJA4P35212 333 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 SOX9P48436 509 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 SLC44A4Q53GD3 710 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 PPP6R3Q5H9R7 873 aaPredicted RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 RWDD4Q6NW29 188 aaKnown RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 CYP4V2Q6ZWL3 525 aaPredicted RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 C14orf80Q86SX3 495 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 RHOT1Q8IXI2 618 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 CFAP52Q8N1V2 620 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 PYROXD2Q8N2H3 581 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 TRMT1Q9NXH9 659 aaKnown RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 CA14Q9ULX7 337 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 CAPN6Q9Y6Q1 641 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 FAM72CH0Y354 149 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 PENKP01210 267 aaPredicted RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 L1CAMP32004 1257 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 SGSHP51688 502 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 RPS24P62847 133 aaKnown RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 NRG1Q02297 640 aaPredicted RBP15.03■□□□□ -0
BRCA1-223ENST00000494123 KRT81Q14533 505 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 CA9Q16790 459 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 MPP7Q5T2T1 576 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 FAM72AQ5TYM5 149 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 FYB2Q5VWT5 728 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 TXNRD3NBQ6F5E7 133 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 FAM72DQ6L9T8 149 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 PEX26Q7Z412 305 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 POLNQ7Z5Q5 900 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 FAM72BQ86X60 149 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 NAT16Q8N8M0 369 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 IGSF8Q969P0 613 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 EXOC4Q96A65 974 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 TBC1D31Q96DN5 1066 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 MYEOVQ96EZ4 313 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 MAGEB5Q9BZ81 275 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 ARHGEF3Q9NR81 526 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 WNT16Q9UBV4 365 aa15.03■□□□□ -0
BRCA1-223ENST00000494123 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.03■□□□□ -0
BRCA1-223ENST00000494123 COL4A3Q01955 1670 aa15.02■□□□□ -0
BRCA1-223ENST00000494123 GOLGA6L9A6NEM1 432 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 SPECC1L-ADORA2AF8WAN1 911 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 EEF2KO00418 725 aaKnown RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 GFRA2O00451 464 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 PSTPIP1O43586 416 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 LRIG2O94898 1065 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 GLULP15104 373 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 HOXD9P28356 352 aaPredicted RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 CTHP32929 405 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 ARL4AP40617 200 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF135P52742 658 aaPredicted RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 TPI1P60174 286 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 ZXDAP98168 799 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 CDH18Q13634 790 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 MLF2Q15773 248 aaPredicted RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 LRRC38Q5VT99 294 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 TPRG1Q6ZUI0 275 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 RALGPS2Q86X27 583 aaPredicted RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 MFN1Q8IWA4 741 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 REXO1L1PQ8IX06 675 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 CARNMT1Q8N4J0 409 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF557Q8N988 423 aaPredicted RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 LRRC57Q8N9N7 239 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 KCTD6Q8NC69 237 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 MSANTD3Q96H12 275 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 KCTD15Q96SI1 283 aaPredicted RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 ZYG11BQ9C0D3 744 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 DNAJC17Q9NVM6 304 aaKnown RBP15.02□□□□□ -0.01
BRCA1-223ENST00000494123 AMFRQ9UKV5 643 aa15.02□□□□□ -0.01
BRCA1-223ENST00000494123 A0A1B0GVM2 712 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms