RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 P4HA1P13674 534 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 CD58P19256 250 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 TBXAS1P24557 533 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-216ENST00000493864 HNRNPH3P31942 346 aaKnown RBP6.96□□□□□ -1.3
TRA2B-216ENST00000493864 SOX5P35711 763 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 PBX3P40426 434 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 PNPLA4P41247 253 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 BRCC3P46736 316 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 TAF6P49848 677 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 BCAR1P56945 870 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 TNNC1P63316 161 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 GUCY1A3Q02108 690 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 GCNT1Q02742 428 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 TCEA2Q15560 299 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ASIC2Q16515 512 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 C21orf62-AS1Q17RA5 79 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 SOWAHAQ2M3V2 549 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 DSTYKQ6XUX3 929 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ENOSF1Q7L5Y1 443 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 LIMS2Q7Z4I7 341 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 TMEM139Q8IV31 216 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 CNGA4Q8IV77 575 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 FAM71AQ8IYT1 594 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 TDHQ8IZJ6 230 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 SLC7A14Q8TBB6 771 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 HASPINQ8TF76 798 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 SYN2Q92777 582 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-216ENST00000493864 JAKMIP2Q96AA8 810 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 UROC1Q96N76 676 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 MRPL45Q9BRJ2 306 aaKnown RBP6.96□□□□□ -1.3
TRA2B-216ENST00000493864 COLEC11Q9BWP8 271 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 CWH43Q9H720 699 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 CYP3A43Q9HB55 503 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ACP6Q9NPH0 428 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 CISHQ9NSE2 258 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ABHD10Q9NUJ1 306 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ZNHIT6Q9NWK9 470 aaKnown RBP6.96□□□□□ -1.3
TRA2B-216ENST00000493864 GDAP2Q9NXN4 497 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 AIPL1Q9NZN9 384 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 PPARGC1AQ9UBK2 798 aaKnown RBP6.96□□□□□ -1.3
TRA2B-216ENST00000493864 MYO6Q9UM54 1294 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 PRG3Q9Y2Y8 225 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-216ENST00000493864 DAAM1Q9Y4D1 1078 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 SNX9Q9Y5X1 595 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 SLC4A7Q9Y6M7 1214 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ZNF503-AS2A6NEH8 195 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 GRXCR1A8MXD5 290 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 NUDT19A8MXV4 375 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 HCRTO43612 131 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 HUS1O60921 280 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 TADA2AO75478 443 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 GJB5O95377 273 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 PLEKP08567 350 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 FERP16591 822 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 ATP2A2P16615 1042 aaKnown RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 CHRNB2P17787 502 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 LMO2P25791 158 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 GNL1P36915 607 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 RAD23BP54727 409 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 HTRA4P83105 476 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 CCZ1BP86790 482 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 CCZ1P86791 482 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 BTG3Q14201 252 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 MEA1Q16626 185 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 WSCD1Q658N2 575 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 TMEM270Q6UE05 265 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 Q7L0L9 218 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 TAS1R1Q7RTX1 841 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 OSTM1Q86WC4 334 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 HERC6Q8IVU3 1022 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 CMTR2Q8IYT2 770 aaKnown RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 PDCL2Q8N4E4 241 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 PHOSPHO2Q8TCD6 241 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 KBTBD7Q8WVZ9 684 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 RSPH1Q8WYR4 309 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 FAXDC2Q96IV6 333 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 FAM81BQ96LP2 452 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 ZNF560Q96MR9 790 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 CLUHP3Q96NS8 147 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 TWNKQ96RR1 684 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 YME1L1Q96TA2 773 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 RAD9AQ99638 391 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 BAG1Q99933 345 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 MRPL9Q9BYD2 267 aaKnown RBP6.95□□□□□ -1.3
TRA2B-216ENST00000493864 ELOVL4Q9GZR5 314 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 TNFRSF12AQ9NP84 129 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 ARHGAP20Q9P2F6 1191 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 HMGXB4Q9UGU5 601 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 L1RE1Q9UN81 338 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 CNTN6Q9UQ52 1028 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 NME7Q9Y5B8 376 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 PCDHA9Q9Y5H5 950 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 NLRC5Q86WI3 1866 aa6.95□□□□□ -1.3
TRA2B-216ENST00000493864 COL4A6Q14031 1691 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 A0A1W2PPC1 479 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 LCHNA4D1U4 455 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms