RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TGM2P21980 687 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 KLRK1P26718 216 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 NR4A2P43354 598 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 PLCD1P51178 756 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 RPL15P61313 204 aaKnown RBP4.87□□□□□ -1.63
ITGB1-216ENST00000493758 PUM3Q15397 648 aaKnown RBP4.87□□□□□ -1.63
ITGB1-216ENST00000493758 RBMS2Q15434 407 aaKnown RBP4.87□□□□□ -1.63
ITGB1-216ENST00000493758 PFKFB4Q16877 469 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 TBRG1Q3YBR2 411 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 TTC22Q5TAA0 569 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 CACNA2D3Q8IZS8 1091 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 SLC2A12Q8TD20 617 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 STYXQ8WUJ0 223 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 HMCESQ96FZ2 354 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 RTKNQ9BST9 563 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 EPS8L2Q9H6S3 715 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 OBP2BQ9NPH6 170 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 ELOVL5Q9NYP7 299 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 CNTN6Q9UQ52 1028 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 TTBK1Q5TCY1 1321 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-216ENST00000493758 ADAM10O14672 748 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 TMEM191BP0C7N4 346 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 PRF1P14222 555 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 ST6GAL1P15907 406 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 RBM6P78332 1123 aaKnown RBP4.86□□□□□ -1.63
ITGB1-216ENST00000493758 ZNF91Q05481 1191 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 MTA1Q13330 715 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 STIM1Q13586 685 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 NFRKBQ6P4R8 1299 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 RAB11FIP2Q7L804 512 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 RHPN2Q8IUC4 686 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 ARFGAP1Q8N6T3 406 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 NANOGP1Q8N7R0 232 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 FAM47BQ8NA70 645 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 STT3BQ8TCJ2 826 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 KAT2BQ92831 832 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 ATP2A3Q93084 1043 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 VCPIP1Q96JH7 1222 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 GPR78Q96P69 363 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 TUBB6Q9BUF5 446 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 SPRTNQ9H040 489 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-216ENST00000493758 MOV10Q9HCE1 1003 aaKnown RBP4.86□□□□□ -1.63
ITGB1-216ENST00000493758 TXNRD2Q9NNW7 524 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 TAGLN3Q9UI15 199 aa4.86□□□□□ -1.63
ITGB1-216ENST00000493758 HERC5Q9UII4 1024 aaKnown RBP4.86□□□□□ -1.63
ITGB1-216ENST00000493758 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-216ENST00000493758 TRBV5-3A0A0A0MS03 114 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 A0A0G2JK05 382 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 DNPH1O43598 174 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 KAT7O95251 611 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 TNFRSF6BO95407 300 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 PNLIPRP1P54315 467 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 SLC37A1P57057 533 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-216ENST00000493758 RHBDL3P58872 404 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 SF3A3Q12874 501 aaKnown RBP eCLIP4.85□□□□□ -1.63
ITGB1-216ENST00000493758 BLMHQ13867 455 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 ANXA2RQ3ZCQ2 193 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 KIAA1755Q5JYT7 1200 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 ZNF793Q6ZN11 406 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 RTL10Q7L3V2 364 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 MYLK4Q86YV6 388 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-216ENST00000493758 SLC44A2Q8IWA5 706 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-216ENST00000493758 OR1N1Q8NGS0 311 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 MCRS1Q96EZ8 462 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 REXO5Q96IC2 774 aaKnown RBP4.85□□□□□ -1.63
ITGB1-216ENST00000493758 PIMREGQ9BSJ6 248 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 HTATIP2Q9BUP3 242 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 DDX23Q9BUQ8 820 aaKnown RBP4.85□□□□□ -1.63
ITGB1-216ENST00000493758 SFXN1Q9H9B4 322 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 PRDM16Q9HAZ2 1276 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 TMEM184CQ9NVA4 438 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 TMEM45AQ9NWC5 275 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 ZNF521Q96K83 1311 aa4.85□□□□□ -1.63
ITGB1-216ENST00000493758 KIR2DS5A0A0G2JLQ3 304 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 EFCAB8A8MWE9 144 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 KIF28PB7ZC32 967 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 KIR2DS3K7RE56 304 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 M0QYT0 321 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 ACTL6BO94805 426 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 TOMM40O96008 361 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 CSTBP04080 98 aaKnown RBP4.84□□□□□ -1.63
ITGB1-216ENST00000493758 AKT1P31749 480 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 MTX1Q13505 466 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 PGM5Q15124 567 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 RABEP1Q15276 862 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 ATPAF1Q5TC12 328 aaPredicted RBP4.84□□□□□ -1.63
ITGB1-216ENST00000493758 LIPMQ5VYY2 423 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 ISM2Q6H9L7 571 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 LRIG3Q6UXM1 1119 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 PABPC3Q9H361 631 aaKnown RBP4.84□□□□□ -1.63
ITGB1-216ENST00000493758 LIN7CQ9NUP9 197 aaKnown RBP4.84□□□□□ -1.63
ITGB1-216ENST00000493758 TMLHEQ9NVH6 421 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 HEY2Q9UBP5 337 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 DAPP1Q9UN19 280 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 C19orf53Q9UNZ5 99 aaPredicted RBP4.84□□□□□ -1.63
ITGB1-216ENST00000493758 LZTS1Q9Y250 596 aa4.84□□□□□ -1.63
ITGB1-216ENST00000493758 PRPF4O43172 522 aaKnown RBP eCLIP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms