RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 FIBINQ8TAL6 211 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 CFAP57Q96MR6 1250 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 PPP1R9BQ96SB3 815 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 CIPCQ9C0C6 399 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 TKTL2Q9H0I9 626 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 SIK2Q9H0K1 926 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 PIGVQ9NUD9 493 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 ZNHIT6Q9NWK9 470 aaKnown RBP16.43■□□□□ 0.22
PSMB4-205ENST00000493673 XPO7Q9UIA9 1087 aaKnown RBP16.43■□□□□ 0.22
PSMB4-205ENST00000493673 RTN2O75298 545 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 FTLP02792 175 aaPredicted RBP16.43■□□□□ 0.22
PSMB4-205ENST00000493673 HNRNPLP14866 589 aaKnown RBP eCLIP16.43■□□□□ 0.22
PSMB4-205ENST00000493673 OXCT1P55809 520 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 RPS24P62847 133 aaKnown RBP16.43■□□□□ 0.22
PSMB4-205ENST00000493673 ATP11AP98196 1134 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 CDH18Q13634 790 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 GEN1Q17RS7 908 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 WDR5BQ86VZ2 330 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 CFAP52Q8N1V2 620 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 EMC1Q8N766 993 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 ABCB8Q9NUT2 735 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 PARVAQ9NVD7 372 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 ARHGEF38Q9NXL2 777 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 GGA2Q9UJY4 613 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 RAB23Q9ULC3 237 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 CLEC4EQ9ULY5 219 aa16.43■□□□□ 0.22
PSMB4-205ENST00000493673 C2CD4BA6NLJ0 364 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 SGK1O00141 431 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 AXIN1O15169 862 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 PAGE1O75459 146 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 ENDOD1O94919 500 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 MOCS3O95396 460 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 LMNAP02545 664 aaKnown RBP16.42■□□□□ 0.22
PSMB4-205ENST00000493673 ATP5BP06576 529 aaKnown RBP16.42■□□□□ 0.22
PSMB4-205ENST00000493673 POLR2EP19388 210 aaKnown RBP16.42■□□□□ 0.22
PSMB4-205ENST00000493673 GPD1P21695 349 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 CASP14P31944 242 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 RFC1P35251 1148 aaPredicted RBP16.42■□□□□ 0.22
PSMB4-205ENST00000493673 AUHQ13825 339 aaKnown RBP16.42■□□□□ 0.22
PSMB4-205ENST00000493673 WDR59Q6PJI9 974 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 DRC7Q8IY82 874 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 AHI1Q8N157 1196 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 TRIM11Q96F44 468 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 P2RY11Q96G91 374 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 C1orf74Q96LT6 269 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 RPRD1AQ96P16 312 aaPredicted RBP16.42■□□□□ 0.22
PSMB4-205ENST00000493673 HHIPQ96QV1 700 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 KIAA1522Q9P206 1035 aaPredicted RBP16.42■□□□□ 0.22
PSMB4-205ENST00000493673 EBF1Q9UH73 591 aa16.42■□□□□ 0.22
PSMB4-205ENST00000493673 ADCY5O95622 1261 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 GYPCP04921 128 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 PABPC1P11940 636 aaKnown RBP16.41■□□□□ 0.22
PSMB4-205ENST00000493673 TFE3P19532 575 aaPredicted RBP16.41■□□□□ 0.22
PSMB4-205ENST00000493673 HLA-FP30511 346 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 PTPN9P43378 593 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 SGSHP51688 502 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 CCDC14Q49A88 953 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 EGFLAMQ63HQ2 1017 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 FBXL22Q6P050 247 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 CHST9Q7L1S5 443 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 STRADAQ7RTN6 431 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 PGBD3Q8N328 593 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 OR8K1Q8NGG5 319 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 JOSD2Q8TAC2 188 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 HAPLN3Q96S86 360 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 PHOX2BQ99453 314 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 PRMT1Q99873 361 aaKnown RBP16.41■□□□□ 0.22
PSMB4-205ENST00000493673 POLR3BQ9NW08 1133 aaPredicted RBP16.41■□□□□ 0.22
PSMB4-205ENST00000493673 TAS2R14Q9NYV8 317 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 ADAMTS1Q9UHI8 967 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 HS3ST4Q9Y661 456 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 MYOFQ9NZM1 2061 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 WDFY4Q6ZS81 3184 aa16.41■□□□□ 0.22
PSMB4-205ENST00000493673 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 DDX3XO00571 662 aaKnown RBP eCLIP16.4■□□□□ 0.223e-7■■□□□ 12.9
PSMB4-205ENST00000493673 LILRB5O75023 590 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 LUC7L3O95232 432 aaKnown RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 MYBL1P10243 752 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 HOXB2P14652 356 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 RRM1P23921 792 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 WASP42768 502 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 PXNP49023 591 aaPredicted RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 ZNF177Q13360 481 aaPredicted RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 STARD3Q14849 445 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 CDO1Q16878 200 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 USP39Q53GS9 565 aaKnown RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 E4F1Q66K89 784 aaPredicted RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 RNF43Q68DV7 783 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 CEP68Q76N32 757 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 VSTM4Q8IW00 320 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 PRICKLE1Q96MT3 831 aaPredicted RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 ZDHHC4Q9NPG8 344 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 CALCOCO1Q9P1Z2 691 aa16.4■□□□□ 0.22
PSMB4-205ENST00000493673 BCCIPQ9P287 314 aaKnown RBP eCLIP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 THAP10Q9P2Z0 257 aaPredicted RBP16.4■□□□□ 0.22
PSMB4-205ENST00000493673 VANGL2Q9ULK5 521 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms