RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 GNA14O95837 355 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 GRIA4P48058 902 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 COPAP53621 1224 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 TBX4P57082 545 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 DAOAP59103 153 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 LRMPQ12912 555 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 MTA1Q13330 715 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 PNOCQ13519 176 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 CNGA2Q16280 664 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 CBWD6Q4V339 395 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 SLC45A4Q5BKX6 768 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 CBWD3Q5JTY5 395 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 CBWD5Q5RIA9 395 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 MBLAC2Q68D91 279 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 MSANTD2Q6P1R3 559 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 GLRX5Q86SX6 157 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL6A3-213ENST00000493475 OR2I1PQ8NGU4 316 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 DHTKD1Q96HY7 919 aaPredicted RBP12.04□□□□□ -0.48
COL6A3-213ENST00000493475 FAM81BQ96LP2 452 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 GOLPH3LQ9H4A5 285 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 CCDC86Q9H6F5 360 aaKnown RBP12.04□□□□□ -0.48
COL6A3-213ENST00000493475 KIAA1522Q9P206 1035 aaPredicted RBP12.04□□□□□ -0.48
COL6A3-213ENST00000493475 SFMBT1Q9UHJ3 866 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 SLC12A6Q9UHW9 1150 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 PCOLCE2Q9UKZ9 415 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 ASCC3Q8N3C0 2202 aaKnown RBP12.04□□□□□ -0.48
COL6A3-213ENST00000493475 TNRC6BQ9UPQ9 1833 aaKnown RBP12.04□□□□□ -0.48
COL6A3-213ENST00000493475 PI4KAP42356 2102 aa12.04□□□□□ -0.48
COL6A3-213ENST00000493475 FRYQ5TBA9 3013 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 LRRC72A6NJI9 287 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 YJEFN3A6XGL0 299 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 E7ENQ6 273 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 ACSL4O60488 711 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 TBL1XO60907 577 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 GJB3O75712 270 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 TOP3BO95985 862 aaKnown RBP12.03□□□□□ -0.48
COL6A3-213ENST00000493475 APOEP02649 317 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 LTFP02788 710 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 HLA-FP30511 346 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 GRK6P43250 576 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 ACADSBP45954 432 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 FMO5P49326 533 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 CCT8P50990 548 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 OXCT1P55809 520 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 NNTQ13423 1086 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 HLA-BQ31612 363 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 USP30Q70CQ3 517 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 KDM1BQ8NB78 822 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 SORCS1Q8WY21 1168 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 FAM149B1Q96BN6 582 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 TIGD1Q96MW7 591 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 ACE2Q9BYF1 805 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-213ENST00000493475 TMEM245Q9H330 911 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 TJP2Q9UDY2 1190 aa12.03□□□□□ -0.48
COL6A3-213ENST00000493475 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-213ENST00000493475 KCNJ18B7U540 433 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 PMM2O15305 246 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 YKT6O15498 198 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 FSBPO95073 299 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 CDK4P11802 303 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 HLA-EP13747 358 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 CD27P26842 260 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 SNX16P57768 344 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 GCNT1Q02742 428 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 ANKRD40Q6AI12 368 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
COL6A3-213ENST00000493475 CYB5D2Q8WUJ1 264 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 IGSF8Q969P0 613 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 CAMK1GQ96NX5 476 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 MED15Q96RN5 788 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 OMDQ99983 421 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 CD93Q9NPY3 652 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 ST7Q9NRC1 585 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL6A3-213ENST00000493475 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 TLR6Q9Y2C9 796 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 CACNA1EQ15878 2313 aa12.02□□□□□ -0.49
COL6A3-213ENST00000493475 A0A1B0GVT2 93 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 TARSL2A2RTX5 802 aaKnown RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 TULP2O00295 520 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 MSI1O43347 362 aaKnown RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 TNFSF14O43557 240 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 SRPRAP08240 638 aaKnown RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 SLC2A3P11169 496 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 CSNK1EP49674 416 aaKnown RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 RGS7P49802 495 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 RPS14P62263 151 aaKnown RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 PIK3R6Q5UE93 754 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 TTC39BQ5VTQ0 682 aaPredicted RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 TMEM215Q68D42 235 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 DSG4Q86SJ6 1040 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 ADIPOR2Q86V24 386 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 PROSER1Q86XN7 944 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 ZC3H3Q8IXZ2 948 aaKnown RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 CARNMT1Q8N4J0 409 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms