RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SNRNP27Q8WVK2 155 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 HIC2Q96JB3 615 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 ZNF578Q96N58 590 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 C7orf25Q9BPX7 421 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 BACH2Q9BYV9 841 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 IRX2Q9BZI1 471 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 UBXN6Q9BZV1 441 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 DNAI2Q9GZS0 605 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 EBF2Q9HAK2 575 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 AASDHPPTQ9NRN7 309 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 FBXL12Q9NXK8 326 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 B8ZZF3 427 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 DXOO77932 396 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 PDCP20941 246 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 HARS2P49590 506 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 YWHAGP61981 247 aaKnown RBP eCLIP14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 INSM1Q01101 510 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 ARID5BQ14865 1188 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 SLC45A4Q5BKX6 768 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 RAB41Q5JT25 222 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 MPP7Q5T2T1 576 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 BROXQ5VW32 411 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 SPOPLQ6IQ16 392 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 SLC9A9Q8IVB4 645 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 ZNF557Q8N988 423 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 TMC2Q8TDI7 906 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 ARID3AQ99856 593 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 OLA1Q9NTK5 396 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 DMAC2Q9NW81 257 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 SERGEFQ9UGK8 458 aa14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 HBS1LQ9Y450 684 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-211ENST00000493468 IKBKBO14920 756 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 ARHGAP6O43182 974 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 RNASEH1O60930 286 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 SLFN14P0C7P3 912 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 C6P13671 934 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 POLR2EP19388 210 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 PIK3CAP42336 1068 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 DLG4P78352 724 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 E2F1Q01094 437 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 CEBPZQ03701 1054 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 KCNJ12Q14500 433 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 PROX2Q3B8N5 592 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 ADGRF1Q5T601 910 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 PPP1R26Q5T8A7 1209 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 SV2AQ7L0J3 742 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 FMNL3Q8IVF7 1028 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 KDM1BQ8NB78 822 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 TMA16Q96EY4 203 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 MYO19Q96H55 970 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 MAGEF1Q9HAY2 307 aa14.84□□□□□ -0.03
PRPF40A-211ENST00000493468 FAM47DPA6NHR8 397 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 TLR4O00206 839 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 HLA-DRAP01903 254 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 KCNC4Q03721 635 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 CST6Q15828 149 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 HNRNPA1L2Q32P51 320 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 PM20D1Q6GTS8 502 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 IQCHQ86VS3 1027 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 DHX40Q8IX18 779 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 LSMEM2Q8N112 164 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 FAM181AQ8N9Y4 354 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 IQUBQ8NA54 791 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 GANCQ8TET4 914 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 TTC9Q92623 222 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 TTC17Q96AE7 1141 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 USP28Q96RU2 1077 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 IMPG2Q9BZV3 1241 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 SEMA4CQ9C0C4 833 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 NEUROG2Q9H2A3 272 aa14.83□□□□□ -0.04
PRPF40A-211ENST00000493468 PVALEFA0A1B0GWK0 134 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 A0A1W2PP55 124 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 WNT9AO14904 365 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 MID1O15344 667 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 LATO43561 262 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 SIN3BO75182 1162 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 KIF20AO95235 890 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 MT-CO3P00414 261 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 ASLP04424 464 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 NASPP49321 788 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 ERVPABLB-1P60509 514 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 ST8SIA6P61647 398 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 OVGP1Q12889 678 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 BNIP3Q12983 259 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 NAPEPLDQ6IQ20 393 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 FAM173BQ6P4H8 233 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 BHLHA9Q7RTU4 235 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 PIGZQ86VD9 579 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 MFSD2AQ8NA29 543 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 WFDC5Q8TCV5 224 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 DHX58Q96C10 678 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 SERAC1Q96JX3 654 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 LMLNQ96KR4 655 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 NIF3L1Q9GZT8 377 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 APOBEC3GQ9HC16 384 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 SLC39A2Q9NP94 309 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 PPP4R2Q9NY27 417 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
PRPF40A-211ENST00000493468 MAGEC1O60732 1142 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms