RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 SLC7A5Q01650 507 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 MTA1Q13330 715 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 BYSLQ13895 437 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 GAREM2Q75VX8 874 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 UNC45BQ8IWX7 931 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 GSPT2Q8IYD1 628 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 GRK7Q8WTQ7 553 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 BTN2A3PQ96KV6 586 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 GCNAQ96QF7 691 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 TRPC7Q9HCX4 862 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 ZDHHC7Q9NXF8 308 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 STIM2Q9P246 746 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 DMGDHQ9UI17 866 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 DNPEPQ9ULA0 475 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 HEXIM1O94992 359 aaKnown RBP14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 ECEL1O95672 775 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 FGF19O95750 216 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 MYL4P12829 197 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 PECAM1P16284 738 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 PTPN2P17706 415 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 HTR7P34969 479 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 ACTN2P35609 894 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 GGCXP38435 758 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 MLLT6P55198 1093 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 LMNB2Q03252 620 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 DPYSQ14117 519 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 DUSP6Q16828 381 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 ACBD5Q5T8D3 534 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 ATL2Q8NHH9 583 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 SLC35B2Q8TB61 432 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 SLCO2A1Q92959 643 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 NKD2Q969F2 451 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 C1orf74Q96LT6 269 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 CCDC114Q96M63 670 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 RNF38Q9H0F5 515 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 ATXN3LQ9H3M9 355 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 XPO7Q9UIA9 1087 aaKnown RBP14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 HEY1Q9Y5J3 304 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 SNX10Q9Y5X0 201 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 HS3ST4Q9Y661 456 aa14.54□□□□□ -0.08
PDZRN3-210ENST00000492909 FAM187AA6NFU0 413 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 MCF2LO15068 1137 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 RNF40O75150 1001 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 GAS8O95995 478 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 SRGAP2BP0DMP2 458 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 EPHB2P29323 1055 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 NRIP1P48552 1158 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 NR2C2P49116 596 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 KCNQ1P51787 676 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 EPHA5P54756 1037 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 VCPP55072 806 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 NRG1Q02297 640 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 NOMO1Q15155 1222 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 NCBP2-AS2Q69YL0 99 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 TXNDC8Q6A555 127 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 C1orf228Q6PIY5 440 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 NPNTQ6UXI9 565 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 JAMLQ86YT9 394 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 MICALL1Q8N3F8 863 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 PPP2R3CQ969Q6 453 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 PLD4Q96BZ4 506 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 MRPL38Q96DV4 380 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 GAS2L1Q99501 681 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 HCFC1R1Q9NWW0 138 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 ZNF148Q9UQR1 794 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 DRG1Q9Y295 367 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 MTCH2Q9Y6C9 303 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 DOCK4Q8N1I0 1966 aa14.53□□□□□ -0.08
PDZRN3-210ENST00000492909 A0A1W2PRU2 124 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 DCLK1O15075 740 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 OLFM2O95897 454 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 MBL2P11226 248 aaPredicted RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 ERCC2P18074 760 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 HDCP19113 662 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 PTGIRP43119 386 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 HARS2P49590 506 aaKnown RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 EIF3EP60228 445 aaKnown RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 CYP4F8P98187 520 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 GUCY2DQ02846 1103 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 OASLQ15646 514 aaKnown RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 PIK3R6Q5UE93 754 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 MANEALQ5VSG8 457 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 LEMD2Q8NC56 503 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 CDCA3Q99618 268 aaPredicted RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 KLF16Q9BXK1 252 aaPredicted RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 PRKD2Q9BZL6 878 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 RAB17Q9H0T7 212 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 ETNK2Q9NVF9 386 aa14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 UTP11Q9Y3A2 253 aaKnown RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 PRRC2BQ5JSZ5 2229 aaKnown RBP14.52□□□□□ -0.08
PDZRN3-210ENST00000492909 NOTCH4Q99466 2003 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 E9PAM4 449 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 AGPSO00116 658 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 STC2O76061 302 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 ITGAVP06756 1048 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 POU2F2P09086 479 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 RBP3P10745 1247 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 FOSL2P15408 326 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 PFKLP17858 780 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms