RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 IFT20Q8IY31 132 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 LGI2Q8N0V4 545 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 MICALL1Q8N3F8 863 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 CCDC33Q8N5R6 958 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 CCDC89Q8N998 374 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 C12orf50Q8NA57 414 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 CCNYQ8ND76 341 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 PCDH19Q8TAB3 1148 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 IFT81Q8WYA0 676 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 ING5Q8WYH8 240 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 BTN2A3PQ96KV6 586 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 MYRFLQ96LU7 910 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 RPRD1AQ96P16 312 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 HAPLN3Q96S86 360 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 CDCA3Q99618 268 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 DDX50Q9BQ39 737 aaKnown RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 HINFPQ9BQA5 517 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 APOL5Q9BWW9 433 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 FRMD8P1Q9BZ68 369 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 NSUN3Q9H649 340 aaKnown RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 EPB41L5Q9HCM4 733 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 ANLNQ9NQW6 1124 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 ARHGEF4Q9NR80 690 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 DZANK1Q9NVP4 752 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 ZDHHC7Q9NXF8 308 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 SEPT10Q9P0V9 454 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 SAE1Q9UBE0 346 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 DNPEPQ9ULA0 475 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 EFR3BQ9Y2G0 817 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 NR2E1Q9Y466 385 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 CPQQ9Y646 472 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 HS3ST4Q9Y661 456 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 TICRRQ7Z2Z1 1910 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 ESYT3A0FGR9 886 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 KCNU1A8MYU2 1149 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 ZNF487B1APH4 448 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 FAM72CH0Y354 149 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 DFFAO00273 331 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 DYNC1I1O14576 645 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 ZNF197O14709 1029 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 SCAMP3O14828 347 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 FGF10O15520 208 aaPredicted RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 LIASO43766 372 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 ACSL4O60488 711 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 STK10O94804 968 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 LRIG2O94898 1065 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 OAS1P00973 400 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 KRT14P02533 472 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 TACR2P21452 398 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 DDX6P26196 483 aaKnown RBP eCLIP8.29□□□□□ -1.08
FDPS-218ENST00000492887 HOXA9P31269 272 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 AVPR1AP37288 418 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 KCNQ1P51787 676 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 VCPP55072 806 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 NTHL1P78549 312 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 SMAD3P84022 425 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 RING1Q06587 406 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 ADCY2Q08462 1091 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 AP1B1Q10567 949 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 CALCOCO2Q13137 446 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 MTA1Q13330 715 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 CAMK1Q14012 370 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 NOMO1Q15155 1222 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 TRIP13Q15645 432 aaPredicted RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 CYP1B1Q16678 543 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 KCTD19Q17RG1 926 aaPredicted RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 MAP9Q49MG5 647 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 RABGAP1LQ5R372 815 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 FAM72AQ5TYM5 149 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 PIK3R6Q5UE93 754 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 SNX30Q5VWJ9 437 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 HEATR6Q6AI08 1181 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 FAM72DQ6L9T8 149 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 TTC27Q6P3X3 843 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 TMC5Q6UXY8 1006 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 B4GALNT4Q76KP1 1039 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 RTL10Q7L3V2 364 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 GET4Q7L5D6 327 aaPredicted RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 FAM72BQ86X60 149 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 DENND1CQ8IV53 801 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 GSPT2Q8IYD1 628 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 C12orf76Q8N812 135 aaPredicted RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 LEMD2Q8NC56 503 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 NETO2Q8NC67 525 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 ATL2Q8NHH9 583 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 HDAC7Q8WUI4 952 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 FAF2Q96CS3 445 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 MRPL38Q96DV4 380 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 TMEM121Q9BTD3 319 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 PRKD2Q9BZL6 878 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 OSBPL2Q9H1P3 480 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 LRRC19Q9H756 370 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 ANKZF1Q9H8Y5 726 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 PRDM16Q9HAZ2 1276 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 FAM114A2Q9NRY5 505 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 GKN1Q9NS71 199 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 MTMR10Q9NXD2 777 aa8.29□□□□□ -1.08
FDPS-218ENST00000492887 DNMT3BQ9UBC3 853 aaKnown RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 FEZ2Q9UHY8 353 aaPredicted RBP8.29□□□□□ -1.08
FDPS-218ENST00000492887 XPO7Q9UIA9 1087 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms