RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TACR2P21452 398 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 NOS2P35228 1153 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 NME3Q13232 169 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 ENPP2Q13822 863 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 ELF2Q15723 593 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 MAP7D1Q3KQU3 841 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 FAM102AQ5T9C2 384 aaPredicted RBP25.57■■□□□ 1.68
UPF3A-209ENST00000492270 PMS2CLQ68D20 193 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 ZNF677Q86XU0 584 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 MFN1Q8IWA4 741 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 GPR161Q8N6U8 529 aaKnown RBP25.57■■□□□ 1.68
UPF3A-209ENST00000492270 ATP6V0D2Q8N8Y2 350 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 WFIKKN2Q8TEU8 576 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 CYB5D2Q8WUJ1 264 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 LOXL4Q96JB6 756 aa25.57■■□□□ 1.68
UPF3A-209ENST00000492270 MBD1Q9UIS9 605 aaPredicted RBP25.57■■□□□ 1.68
UPF3A-209ENST00000492270 SMTNL1A8MU46 457 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 KCNU1A8MYU2 1149 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 GOLGA8SH3BPF8 625 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 LRP3O75074 770 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 PRKCHP24723 683 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 MATKP42679 507 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 IQCB1Q15051 598 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 CARNMT1Q8N4J0 409 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 RNF34Q969K3 372 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 RMDN1Q96DB5 314 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 LMLNQ96KR4 655 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 SMOC1Q9H4F8 434 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 CD93Q9NPY3 652 aa25.56■■□□□ 1.68
UPF3A-209ENST00000492270 TYW5A2RUC4 315 aaKnown RBP25.55■■□□□ 1.68
UPF3A-209ENST00000492270 M0QYT0 321 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 RHOBTB1O94844 696 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 CYP1A1P04798 512 aaPredicted RBP25.55■■□□□ 1.68
UPF3A-209ENST00000492270 CCR1P32246 355 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 ARID5AQ03989 594 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 LMAN2Q12907 356 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 CSRP2Q16527 193 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 FUT11Q495W5 492 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 MBLAC2Q68D91 279 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 TRNP1Q6NT89 227 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 AHI1Q8N157 1196 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 SPACA7Q96KW9 195 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 NPY6RQ99463 290 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 PRMT1Q99873 361 aaKnown RBP25.55■■□□□ 1.68
UPF3A-209ENST00000492270 RTN4Q9NQC3 1192 aaKnown RBP25.55■■□□□ 1.68
UPF3A-209ENST00000492270 PIGVQ9NUD9 493 aa25.55■■□□□ 1.68
UPF3A-209ENST00000492270 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.55■■□□□ 1.68
UPF3A-209ENST00000492270 NPC1O15118 1278 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 HLA-EP13747 358 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 ABCB4P21439 1286 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 FLT3P36888 993 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 SCNN1AP37088 669 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 GGCXP38435 758 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 ID4P47928 161 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 SULT1E1P49888 294 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 STARD3Q14849 445 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 FSCBQ5H9T9 825 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 PRR23CQ6ZRP0 262 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 MMS22LQ6ZRQ5 1243 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 CIR1Q86X95 450 aaPredicted RBP25.54■■□□□ 1.68
UPF3A-209ENST00000492270 ZNF366Q8N895 744 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 SLC30A5Q8TAD4 765 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 FIBINQ8TAL6 211 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 MRGPRX1Q96LB2 322 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 PCDHB18PQ96TA0 734 aa25.54■■□□□ 1.68
UPF3A-209ENST00000492270 LAMA1P25391 3075 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 F5H5T6 163 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 TIMM44O43615 452 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 LUC7L3O95232 432 aaKnown RBP25.53■■□□□ 1.68
UPF3A-209ENST00000492270 EPHX1P07099 455 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 SLC2A3P11169 496 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 MPLP40238 635 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 CREB5Q02930 508 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 SF3A2Q15428 464 aaKnown RBP25.53■■□□□ 1.68
UPF3A-209ENST00000492270 PTPRNQ16849 979 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 SERPINA13PQ6UXR4 307 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 C11orf74Q86VG3 221 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 MSANTD4Q8NCY6 345 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 TBCBQ99426 244 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 ANLNQ9NQW6 1124 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 SLC12A6Q9UHW9 1150 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 INTS6Q9UL03 887 aaKnown RBP25.53■■□□□ 1.68
UPF3A-209ENST00000492270 CYP8B1Q9UNU6 501 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 DOCK4Q8N1I0 1966 aa25.53■■□□□ 1.68
UPF3A-209ENST00000492270 DNAH14Q0VDD8 3507 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 IRAK1P51617 712 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 LMNB2Q03252 620 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 CDH18Q13634 790 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 RSPO4Q2I0M5 234 aaPredicted RBP25.52■■□□□ 1.68
UPF3A-209ENST00000492270 FNDC3BQ53EP0 1204 aaKnown RBP25.52■■□□□ 1.68
UPF3A-209ENST00000492270 PLA2G2CQ5R387 149 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 KIAA1324Q6UXG2 1013 aaKnown RBP25.52■■□□□ 1.68
UPF3A-209ENST00000492270 ARMCX6Q7L4S7 300 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 PHLDB2Q86SQ0 1253 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 TMEFF1Q8IYR6 380 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 NT5C3BQ969T7 300 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 C11orf70Q9BRQ4 267 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 MKRN2Q9H000 416 aaKnown RBP25.52■■□□□ 1.68
UPF3A-209ENST00000492270 METTL5Q9NRN9 209 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms