RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SIX2Q9NPC8 291 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 PRSS16Q9NQE7 514 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 ANLNQ9NQW6 1124 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 CNGB3Q9NQW8 809 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 SLC6A14Q9UN76 642 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 HBS1LQ9Y450 684 aaKnown RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 PTPRBP23467 1997 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 MAP1BP46821 2468 aaKnown RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 A0A1B0GVT2 93 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 MEI4A8MW99 385 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 TTC34A8MYJ7 566 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 I6L893 689 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 RNF103O00237 685 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 SYNCRIPO60506 623 aaKnown RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 FOXD2O60548 495 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 SIN3BO75182 1162 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 GJB3O75712 270 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 SERPINF2P08697 491 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 CSNK1EP49674 416 aaKnown RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 CLDN6P56747 220 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 SLC8A3P57103 927 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 CENPCQ03188 943 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 GFPT1Q06210 699 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 STIM1Q13586 685 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 DUOXA1Q1HG43 343 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 DPCR1Q3MIW9 517 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 RAB6CQ53S08 254 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 DCAF6Q58WW2 860 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 OTUD1Q5VV17 481 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 DPY19L2P1Q6NXN4 242 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 TRIM65Q6PJ69 517 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 SLC36A4Q6YBV0 504 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 KIAA0907Q7Z7F0 614 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 C11orf74Q86VG3 221 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 LGI2Q8N0V4 545 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 ZNF606Q8WXB4 792 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 PRCCQ92733 491 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 SLC39A13Q96H72 371 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 FAXDC2Q96IV6 333 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 RPL10LQ96L21 214 aaKnown RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 MRGPRX3Q96LB0 322 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 CPXM1Q96SM3 734 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 RAB6CQ9H0N0 254 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 EBF2Q9HAK2 575 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 OLA1Q9NTK5 396 aaKnown RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 SLCO3A1Q9UIG8 710 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 STOML2Q9UJZ1 356 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 BTBD3Q9Y2F9 522 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 FNDC3AQ9Y2H6 1198 aaKnown RBP9.25□□□□□ -0.93
HDAC3-211ENST00000491581 ZNF510Q9Y2H8 683 aa9.25□□□□□ -0.93
HDAC3-211ENST00000491581 FAM47DPA6NHR8 397 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 GOLGA8CPA6NN73 597 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 CBX4O00257 560 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 ZNF217O75362 1048 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 ERBB2P04626 1255 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 PON1P27169 355 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 MZF1P28698 734 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 GNA15P30679 374 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 CSKP41240 450 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 KLK7P49862 253 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 ATXN3P54252 364 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 MARSP56192 900 aaKnown RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 YWHAEP62258 255 aaKnown RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 GCNT1Q02742 428 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 ARID5AQ03989 594 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 CAMK2GQ13555 558 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 STARD3Q14849 445 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 POM121L1PQ3SYA9 428 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 PREPLQ4J6C6 727 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 MS4A13Q5J8X5 152 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 FAM183BPQ6ZVS7 135 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 PHLDB2Q86SQ0 1253 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 C14orf80Q86SX3 495 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 SLC47A2Q86VL8 602 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 MFN1Q8IWA4 741 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 DEFB106AQ8N104 65 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 TTC39CQ8N584 583 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 C1orf131Q8NDD1 294 aaKnown RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 OR2T3Q8NH03 318 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 DDX1Q92499 740 aaKnown RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 BIRC7Q96CA5 298 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 CDK5RAP1Q96SZ6 601 aaKnown RBP9.24□□□□□ -0.93
HDAC3-211ENST00000491581 ORAI3Q9BRQ5 295 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 SLC4A5Q9BY07 1137 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 ZMIZ1Q9ULJ6 1067 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 CNTN6Q9UQ52 1028 aa9.24□□□□□ -0.93
HDAC3-211ENST00000491581 METTL12A8MUP2 240 aa9.23□□□□□ -0.93
HDAC3-211ENST00000491581 PMM2O15305 246 aa9.23□□□□□ -0.93
HDAC3-211ENST00000491581 MID1O15344 667 aa9.23□□□□□ -0.93
HDAC3-211ENST00000491581 IRAK2O43187 625 aa9.23□□□□□ -0.93
HDAC3-211ENST00000491581 OPHN1O60890 802 aa9.23□□□□□ -0.93
HDAC3-211ENST00000491581 FSBPO95073 299 aa9.23□□□□□ -0.93
HDAC3-211ENST00000491581 TRUB2O95900 331 aaKnown RBP9.23□□□□□ -0.93
HDAC3-211ENST00000491581 IGLV3-25P01717 112 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms