RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 SNX19Q92543 992 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 NUP58Q9BVL2 599 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 SCNM1Q9BWG6 230 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 IRX2Q9BZI1 471 aaPredicted RBP14.17□□□□□ -0.14
COL6A3-211ENST00000491233 NUCKS1Q9H1E3 243 aaKnown RBP14.17□□□□□ -0.14
COL6A3-211ENST00000491233 UBE2TQ9NPD8 197 aaPredicted RBP14.17□□□□□ -0.14
COL6A3-211ENST00000491233 PLA2G4CQ9UP65 541 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 NAALADL1Q9UQQ1 740 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 NFE2L3Q9Y4A8 694 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 PLXNA2O75051 1894 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 TYW5A2RUC4 315 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 METTL12A8MUP2 240 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 HYAL3O43820 417 aaPredicted RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 LETM1O95202 739 aaPredicted RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 MOCS2O96007 188 aaPredicted RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 ATP5BP06576 529 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 DLDP09622 509 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 POLR2EP19388 210 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 ACADSBP45954 432 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 RPL34P49207 117 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 RPS24P62847 133 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 FAM193AP78312 1265 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 NNTQ13423 1086 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 SCUBE3Q8IX30 993 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 AZIN2Q96A70 460 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 MYEOVQ96EZ4 313 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 SLC39A13Q96H72 371 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 DDX50Q9BQ39 737 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 TMEM121BQ9BXQ6 578 aaPredicted RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 ZDHHC5Q9C0B5 715 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 FBRSQ9HAH7 460 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 ACP6Q9NPH0 428 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 PRSS16Q9NQE7 514 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 EIF2B4Q9UI10 523 aaKnown RBP14.16□□□□□ -0.14
COL6A3-211ENST00000491233 TLR6Q9Y2C9 796 aa14.16□□□□□ -0.14
COL6A3-211ENST00000491233 E5RJQ4 531 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 BCAT2O15382 392 aaPredicted RBP14.15□□□□□ -0.14
COL6A3-211ENST00000491233 PAPSS1O43252 624 aaPredicted RBP14.15□□□□□ -0.14
COL6A3-211ENST00000491233 THAP12O43422 761 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 MED7O43513 233 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 FGFR1OPO95684 399 aaKnown RBP14.15□□□□□ -0.14
COL6A3-211ENST00000491233 GNA15P30679 374 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 ACSL1P33121 698 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 RPS14P62263 151 aaKnown RBP14.15□□□□□ -0.14
COL6A3-211ENST00000491233 CDH18Q13634 790 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 MEA1Q16626 185 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 MS4A13Q5J8X5 152 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 SYPL2Q5VXT5 272 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 GJB7Q6PEY0 223 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 TRIM65Q6PJ69 517 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 ENOSF1Q7L5Y1 443 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 LMLNQ96KR4 655 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 CAMK1GQ96NX5 476 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 CRACR2AQ9BSW2 395 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 SLC4A5Q9BY07 1137 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 PCED1AQ9H1Q7 454 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 MTG2Q9H4K7 406 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 C6orf106Q9H6K1 298 aaPredicted RBP14.15□□□□□ -0.14
COL6A3-211ENST00000491233 CYTH4Q9UIA0 394 aa14.15□□□□□ -0.14
COL6A3-211ENST00000491233 XPO7Q9UIA9 1087 aaKnown RBP14.15□□□□□ -0.14
COL6A3-211ENST00000491233 CAPN9O14815 690 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 SH3BP5O60239 455 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 LUC7L3O95232 432 aaKnown RBP14.14□□□□□ -0.15
COL6A3-211ENST00000491233 APOEP02649 317 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 DNTTP04053 509 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 C7P10643 843 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 CSKP41240 450 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 SLC14A1Q13336 389 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 PDCLQ13371 301 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
COL6A3-211ENST00000491233 DCAF6Q58WW2 860 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 ZNF776Q68DI1 518 aaPredicted RBP14.14□□□□□ -0.15
COL6A3-211ENST00000491233 BEND5Q7L4P6 421 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 CHSY1Q86X52 802 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 CREBRFQ8IUR6 639 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 NAXDQ8IW45 347 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 CCDC117Q8IWD4 279 aaPredicted RBP14.14□□□□□ -0.15
COL6A3-211ENST00000491233 CFAP52Q8N1V2 620 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 FIBINQ8TAL6 211 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 STK32AQ8WU08 396 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 ZNF606Q8WXB4 792 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 GATA6Q92908 595 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 MYO19Q96H55 970 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 TRIM62Q9BVG3 475 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 IL21RQ9HBE5 538 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 TJP2Q9UDY2 1190 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 RWDD2AQ9UIY3 292 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 KLK13Q9UKR3 277 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 INTS6Q9UL03 887 aaKnown RBP14.14□□□□□ -0.15
COL6A3-211ENST00000491233 NEUROG3Q9Y4Z2 214 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 SLCO1B1Q9Y6L6 691 aa14.14□□□□□ -0.15
COL6A3-211ENST00000491233 BECN2A8MW95 431 aa14.13□□□□□ -0.15
COL6A3-211ENST00000491233 SEMA4FO95754 770 aa14.13□□□□□ -0.15
COL6A3-211ENST00000491233 CER1O95813 267 aa14.13□□□□□ -0.15
COL6A3-211ENST00000491233 TRUB2O95900 331 aaKnown RBP14.13□□□□□ -0.15
COL6A3-211ENST00000491233 ASLP04424 464 aa14.13□□□□□ -0.15
COL6A3-211ENST00000491233 SLC9A1P19634 815 aa14.13□□□□□ -0.15
COL6A3-211ENST00000491233 USP8P40818 1118 aa14.13□□□□□ -0.15
COL6A3-211ENST00000491233 MATKP42679 507 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms