RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 ULBP1Q9BZM6 244 aa21.7■■□□□ 1.06
NELFE-210ENST00000491139 RSPH9Q9H1X1 276 aaPredicted RBP21.7■■□□□ 1.06
NELFE-210ENST00000491139 PRORYQ9H606 182 aa21.7■■□□□ 1.06
NELFE-210ENST00000491139 SERTAD1Q9UHV2 236 aa21.7■■□□□ 1.06
NELFE-210ENST00000491139 SCML1Q9UN30 329 aa21.7■■□□□ 1.06
NELFE-210ENST00000491139 COL5A1P20908 1838 aaPredicted RBP21.7■■□□□ 1.06
NELFE-210ENST00000491139 CFAP46Q8IYW2 2715 aa21.7■■□□□ 1.06
NELFE-210ENST00000491139 LATS1O95835 1130 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 ITGAVP06756 1048 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 KRT13P13646 458 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 ME1P48163 572 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 CLDN6P56747 220 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 DNAJC3Q13217 504 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 ARHGAP17Q68EM7 881 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 ZC3H3Q8IXZ2 948 aaKnown RBP21.69■■□□□ 1.06
NELFE-210ENST00000491139 SLC4A11Q8NBS3 891 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 NDRG1Q92597 394 aaKnown RBP21.69■■□□□ 1.06
NELFE-210ENST00000491139 PABPC3Q9H361 631 aaKnown RBP21.69■■□□□ 1.06
NELFE-210ENST00000491139 CISHQ9NSE2 258 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 FBXL12Q9NXK8 326 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 SFMBT1Q9UHJ3 866 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 PCDHA7Q9UN72 937 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 TRAF3IP3Q9Y228 551 aa21.69■■□□□ 1.06
NELFE-210ENST00000491139 CBX4O00257 560 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 TLX3O43711 291 aaPredicted RBP21.68■■□□□ 1.06
NELFE-210ENST00000491139 C1QL1O75973 258 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 RAD23BP54727 409 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 GALCP54803 685 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 TARDBPQ13148 414 aaKnown RBP eCLIP21.68■■□□□ 1.06
NELFE-210ENST00000491139 LSM14AQ8ND56 463 aaKnown RBP21.68■■□□□ 1.06
NELFE-210ENST00000491139 SAP25Q8TEE9 199 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 BAP1Q92560 729 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 SNX21Q969T3 373 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 PAGE5Q96GU1 130 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 FAXDC2Q96IV6 333 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 NRSN2Q9GZP1 204 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 LRRC4Q9HBW1 653 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 AASDHPPTQ9NRN7 309 aa21.68■■□□□ 1.06
NELFE-210ENST00000491139 TP53BP1Q12888 1972 aaPredicted RBP21.68■■□□□ 1.06
NELFE-210ENST00000491139 PLXNA2O75051 1894 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 YKT6O15498 198 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 RNASEH1O60930 286 aaKnown RBP21.67■■□□□ 1.06
NELFE-210ENST00000491139 NR2F2P24468 414 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 CD70P32970 193 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 ST8SIA6P61647 398 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 MPP7Q5T2T1 576 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 BSPRYQ5W0U4 402 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 NCEH1Q6PIU2 408 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 BHLHA9Q7RTU4 235 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 FAM186BQ8IYM0 893 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 EDEM1Q92611 657 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 FCRL3Q96P31 734 aaPredicted RBP21.67■■□□□ 1.06
NELFE-210ENST00000491139 IPO9Q96P70 1041 aaKnown RBP21.67■■□□□ 1.06
NELFE-210ENST00000491139 MTG2Q9H4K7 406 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 TMEM8AQ9HCN3 771 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 RAI2Q9Y5P3 530 aa21.67■■□□□ 1.06
NELFE-210ENST00000491139 LRRC72A6NJI9 287 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 K7ELQ4 463 aaPredicted RBP21.66■■□□□ 1.06
NELFE-210ENST00000491139 TBL1XO60907 577 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 WNT1P04628 370 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 CD38P28907 300 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 ARRB1P49407 418 aaPredicted RBP21.66■■□□□ 1.06
NELFE-210ENST00000491139 ACADVLP49748 655 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 SGSHP51688 502 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 ENPEPQ07075 957 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 RTP5Q14D33 572 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 SHBQ15464 509 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 FOXD4L6Q3SYB3 417 aaPredicted RBP21.66■■□□□ 1.06
NELFE-210ENST00000491139 HES3Q5TGS1 186 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 FOXD4L3Q6VB84 417 aaPredicted RBP21.66■■□□□ 1.06
NELFE-210ENST00000491139 EID2Q8N6I1 236 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 ZNF557Q8N988 423 aaPredicted RBP21.66■■□□□ 1.06
NELFE-210ENST00000491139 WFDC5Q8TCV5 224 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 GDF3Q9NR23 364 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 SERGEFQ9UGK8 458 aa21.66■■□□□ 1.06
NELFE-210ENST00000491139 TULP2O00295 520 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 XPO1O14980 1071 aaKnown RBP21.65■■□□□ 1.06
NELFE-210ENST00000491139 ACTN4O43707 911 aaKnown RBP21.65■■□□□ 1.06
NELFE-210ENST00000491139 PSMC2P35998 433 aaKnown RBP21.65■■□□□ 1.06
NELFE-210ENST00000491139 NFIL3Q16649 462 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 GOLGA7BQ2TAP0 167 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 FOXD4L5Q5VV16 416 aaPredicted RBP21.65■■□□□ 1.06
NELFE-210ENST00000491139 KRT39Q6A163 491 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 RFWD3Q6PCD5 774 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 OR2T34Q8NGX1 318 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 FOXD4L4Q8WXT5 416 aaPredicted RBP21.65■■□□□ 1.06
NELFE-210ENST00000491139 IRX2Q9BZI1 471 aaPredicted RBP21.65■■□□□ 1.06
NELFE-210ENST00000491139 NEUROG2Q9H2A3 272 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 EBF2Q9HAK2 575 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 ABCC13Q9NSE7 274 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 ARID1BQ8NFD5 2236 aaPredicted RBP21.65■■□□□ 1.06
NELFE-210ENST00000491139 MYLKQ15746 1914 aa21.65■■□□□ 1.06
NELFE-210ENST00000491139 A0A1W2PP55 124 aa21.64■■□□□ 1.05
NELFE-210ENST00000491139 MSI1O43347 362 aaKnown RBP21.64■■□□□ 1.05
NELFE-210ENST00000491139 SIN3BO75182 1162 aa21.64■■□□□ 1.05
NELFE-210ENST00000491139 RNASEH2AO75792 299 aaKnown RBP21.64■■□□□ 1.05
NELFE-210ENST00000491139 RPL13P26373 211 aaKnown RBP21.64■■□□□ 1.05
NELFE-210ENST00000491139 GTF2H1P32780 548 aa21.64■■□□□ 1.05
NELFE-210ENST00000491139 ADIGQ0VDE8 80 aa21.64■■□□□ 1.05
NELFE-210ENST00000491139 CST6Q15828 149 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms