RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 LPPQ93052 612 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 TOP1MTQ969P6 601 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 TMEM143Q96AN5 459 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 CCDC51Q96ER9 411 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 PPP1R13BQ96KQ4 1090 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 LRRC37BQ96QE4 947 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 TGS1Q96RS0 853 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 CTAGE1Q96RT6 745 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 CDK5RAP1Q96SZ6 601 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 ADAM2Q99965 735 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 ADPGKQ9BRR6 497 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 MRPL9Q9BYD2 267 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 XPO4Q9C0E2 1151 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 OR10A2Q9H208 303 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 BHMT2Q9H2M3 363 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 C12orf65Q9H3J6 166 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 DHX33Q9H6R0 707 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 UBN1Q9NPG3 1134 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 OXSMQ9NWU1 459 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 TRMT1Q9NXH9 659 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 IFNKQ9P0W0 207 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 LARSQ9P2J5 1176 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 PIN4Q9Y237 131 aaKnown RBP5.07□□□□□ -1.6
CSTF1-205ENST00000490539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.07□□□□□ -1.63e-7■■■□□ 14.7
CSTF1-205ENST00000490539 CLIC4Q9Y696 253 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 LTBP2Q14767 1821 aa5.07□□□□□ -1.6
CSTF1-205ENST00000490539 A0A087WZ62 844 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 IGKV6-21A0A0C4DH24 114 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 A0A1B0GVL5 298 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 CCDC169A6NNP5 214 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 K7ERI5 159 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 ATP8B1O43520 1251 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 EDIL3O43854 480 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 LPXNO60711 386 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 PPP6R2O75170 966 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 GPR32O75388 356 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 MED24O75448 989 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 SMC2O95347 1197 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 CNOT4O95628 575 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 PRLP01236 227 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 CA3P07451 260 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 TPM1P09493 284 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 PFKFB1P16118 471 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 CYP11B2P19099 503 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 HSD3B2P26439 372 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 STAT6P42226 847 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 NAMPTP43490 491 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 ALDH7A1P49419 539 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 RABGGTBP53611 331 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 IL2P60568 153 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 KRT17Q04695 432 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 RNASELQ05823 741 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 MGAT3Q09327 533 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 SLC39A14Q15043 492 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 TERF2Q15554 542 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 AGBL4Q5VU57 503 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 RRAGBQ5VZM2 374 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 NOTUMQ6P988 496 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 FBXO38Q6PIJ6 1188 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 STXBP4Q6ZWJ1 553 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 MAEAQ7L5Y9 396 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 URGCPQ8TCY9 931 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 ARNTL2Q8WYA1 636 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 GFM2Q969S9 779 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 FOXRED1Q96CU9 486 aaPredicted RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 NEIL1Q96FI4 390 aaPredicted RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 FAM193BQ96PV7 902 aaPredicted RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 ELF4Q99607 663 aaPredicted RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 SH2D3AQ9BRG2 576 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 FDXACB1Q9BRP7 624 aaPredicted RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 TARS2Q9BW92 718 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 NFKBIZQ9BYH8 718 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 POLR3FQ9H1D9 316 aaPredicted RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 TMX1Q9H3N1 280 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 ZHX3Q9H4I2 956 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 ELAC1Q9H777 363 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 RGS18Q9NS28 235 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 PRMT7Q9NVM4 692 aaPredicted RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 THG1LQ9NWX6 298 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 TMEM161AQ9NX61 479 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 KCMF1Q9P0J7 381 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 STK39Q9UEW8 545 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 HPSEQ9Y251 543 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 NOC2LQ9Y3T9 749 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 TCAF1Q9Y4C2 921 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 SRPRBQ9Y5M8 271 aaKnown RBP5.06□□□□□ -1.6
CSTF1-205ENST00000490539 EVPLQ92817 2033 aa5.06□□□□□ -1.6
CSTF1-205ENST00000490539 GVINP1Q7Z2Y8 2422 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 TANC1Q9C0D5 1861 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ADGRA3Q8IWK6 1321 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ANKRD17O75179 2603 aaKnown RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 A0A087WWV3 80 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 A0A0U1RQF3 1178 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 TMEM150BA6NC51 233 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 GRXCR1A8MXD5 290 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 DVL2O14641 736 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ARHGAP6O43182 974 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 APOL3O95236 402 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 RB1P06400 928 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms