RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ACOT1Q86TX2 421 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 MFSD2AQ8NA29 543 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 LARP4BQ92615 738 aaKnown RBP14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 SGF29Q96ES7 293 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 SEMA3CQ99985 751 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 FGFBP2Q9BYJ0 223 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 CSNK1G1Q9HCP0 422 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 TJP2Q9UDY2 1190 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 RASAL2Q9UJF2 1139 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 ATXN7L1Q9ULK2 861 aaPredicted RBP14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 CACNA1DQ01668 2161 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 ABCA12Q86UK0 2595 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 LY6G6EA0A0G2JKS1 128 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 ITGB2P05107 769 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 TGM2P21980 687 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 UBA7P41226 1012 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 MYL6P60660 151 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 CST6Q15828 149 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 HS1BP3Q53T59 392 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 MBLAC2Q68D91 279 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 NAPEPLDQ6IQ20 393 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 SCD5Q86SK9 330 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 CPXM2Q8N436 756 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 MAPK15Q8TD08 544 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 SLC2A14Q8TDB8 520 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 WFIKKN2Q8TEU8 576 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 APOLD1Q96LR9 279 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 OMDQ99983 421 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 DCLK3Q9C098 648 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 EPN3Q9H201 632 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 SUN2Q9UH99 717 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 NAGPAQ9UK23 515 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 SCML1Q9UN30 329 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 ENTPD2Q9Y5L3 495 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 U3KQA8 63 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 ITPR2Q14571 2701 aa14.3□□□□□ -0.12
EXOSC3-207ENST00000490516 ZNF233A6NK53 670 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 HHLA1C9JL84 531 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 SLC26A4O43511 780 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 LZTS3O60299 673 aaPredicted RBP14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 SIN3BO75182 1162 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 PPFIA2O75334 1257 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 GJB6O95452 261 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 GP1BAP07359 652 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 DLDP09622 509 aaKnown RBP14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 GIMD1P0DJR0 217 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 SFTPCP11686 197 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 DUSP3P51452 185 aaPredicted RBP14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 COG7P83436 770 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 FOXK1P85037 733 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 PDE4CQ08493 712 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 EFEMP1Q12805 493 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 SURF1Q15526 300 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 SKIDA1Q1XH10 827 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 PTRH1Q86Y79 214 aaKnown RBP14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 MMAAQ8IVH4 418 aaKnown RBP14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 FAM26EQ8N5C1 309 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 OR14C36Q8NHC7 312 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 ELMO3Q96BJ8 720 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 TNIP3Q96KP6 325 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 GGA2Q9UJY4 613 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 FZD4Q9ULV1 537 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 PCDHGA8Q9Y5G5 932 aa14.29□□□□□ -0.12
EXOSC3-207ENST00000490516 LATO43561 262 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 TNFSF15O95150 251 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 DLATP10515 647 aaKnown RBP14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 PABPC1P11940 636 aaKnown RBP14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 TNNI1P19237 187 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 ADPRHP54922 357 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 INHBCP55103 352 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 RP1P56715 2156 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 SFSWAPQ12872 951 aaKnown RBP14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 TGIF1Q15583 401 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 TBR1Q16650 682 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 ARL6IP4Q66PJ3 421 aaKnown RBP14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 SCARA5Q6ZMJ2 495 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 KIAA0907Q7Z7F0 614 aaPredicted RBP14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 FAM217AQ8IXS0 508 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 AHI1Q8N157 1196 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 ARL14Q8N4G2 192 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 AADATQ8N5Z0 425 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 FAM184AQ8NB25 1140 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 IFI44Q8TCB0 444 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 HPS3Q969F9 1004 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 MYO19Q96H55 970 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 AK8Q96MA6 479 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 SDCBP2Q9H190 292 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 XYLT2Q9H1B5 865 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 SLC25A18Q9H1K4 315 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 LRRC4CQ9HCJ2 640 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 FAM49BQ9NUQ9 324 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 ARHGAP20Q9P2F6 1191 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 SEL1LQ9UBV2 794 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 CA5BQ9Y2D0 317 aa14.28□□□□□ -0.12
EXOSC3-207ENST00000490516 TBC1D3DA0A087WVF3 549 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms