RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 KBTBD7Q8WVZ9 684 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF274Q96GC6 653 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 C8orf48Q96LL4 319 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF560Q96MR9 790 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 SLITRK1Q96PX8 696 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 CCNL2Q96S94 520 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 MSTO1Q9BUK6 570 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 SLC25A18Q9H1K4 315 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 LHX5Q9H2C1 402 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 CCSER2Q9H7U1 834 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 LRRC4CQ9HCJ2 640 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 GDF3Q9NR23 364 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 GDAP2Q9NXN4 497 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 EHD2Q9NZN4 543 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 WDR35Q9P2L0 1181 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 SATB2Q9UPW6 733 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 ANKHD1Q8IWZ3 2542 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 PTPRJQ12913 1337 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 ZFC3H1O60293 1989 aaKnown RBP7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 LRRK1Q38SD2 2015 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 A0A1B0GVM2 712 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 HUS1O60921 280 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 PPFIA2O75334 1257 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 ZDHHC11BP0C7U3 371 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 IRF1P10914 325 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 SFTPCP11686 197 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 XBP1P17861 261 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 LMO2P25791 158 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 ANXA13P27216 316 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 MCM7P33993 719 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 PNPLA4P41247 253 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 LHX1P48742 406 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 ACOT2P49753 483 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 LIG4P49917 911 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 SMTNP53814 917 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 INHBCP55103 352 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 CDH8P55286 799 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 NXPH1P58417 271 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 SRSF6Q13247 344 aaKnown RBP7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 KCNJ12Q14500 433 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 SKIDA1Q1XH10 827 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 SOWAHAQ2M3V2 549 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 ZSCAN23Q3MJ62 389 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 C3orf38Q5JPI3 329 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 MCTP1Q6DN14 999 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 CPLX2Q6PUV4 134 aaKnown RBP7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 KCNK18Q7Z418 384 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 TICAM1Q8IUC6 712 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 SGF29Q96ES7 293 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 CCDC97Q96F63 343 aaPredicted RBP7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 BICD1Q96G01 975 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 PCED1BQ96HM7 432 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 SYT15Q9BQS2 421 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 BTBD1Q9H0C5 482 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 ERVMER34-1Q9H9K5 563 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 PLK2Q9NYY3 685 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 NME7Q9Y5B8 376 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 PCDHGA8Q9Y5G5 932 aa7.51□□□□□ -1.21
PDLIM1-203ENST00000490391 DOCK9Q9BZ29 2069 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 NOBOXO60393 691 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 PENKP01210 267 aaPredicted RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 EPHX1P07099 455 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 OR52Z1P0C646 297 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 FDPSP14324 419 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 ELAVL4P26378 380 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 CD38P28907 300 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 POLR2BP30876 1174 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 PGFP49763 221 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 TUBP50607 506 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 DUSP3P51452 185 aaPredicted RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 RAD51AP2Q09MP3 1159 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 STK3Q13188 491 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF211Q13398 564 aaPredicted RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 TBR1Q16650 682 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 ISXQ2M1V0 245 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 SGO2Q562F6 1265 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 HECTD3Q5T447 861 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 TDRD10Q5VZ19 366 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 TMEM215Q68D42 235 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 KIAA0895LQ68EN5 471 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 CRELD2Q6UXH1 353 aaPredicted RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 SPATS2Q86XZ4 545 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 SLC25A45Q8N413 288 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 C1orf127Q8N9H9 656 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 PDZD8Q8NEN9 1154 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF564Q8TBZ8 553 aaPredicted RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 SORCS1Q8WY21 1168 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 OVCA2Q8WZ82 227 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 BHMTQ93088 406 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 PIWIL1Q96J94 861 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 FAM84AQ96KN4 292 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 TIPINQ9BVW5 301 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF768Q9H5H4 540 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 SGK2Q9HBY8 427 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 GEMIN8Q9NWZ8 242 aaKnown RBP7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 ELOVL2Q9NXB9 296 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms