RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 F8VZ95 297 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 H0Y626 953 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 DAB1O75553 588 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 GRAP2O75791 330 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 MOCS3O95396 460 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 LSM8O95777 96 aaKnown RBP18.08■□□□□ 0.48
SEC13-218ENST00000490283 DLDP09622 509 aaKnown RBP18.08■□□□□ 0.48
SEC13-218ENST00000490283 ST8SIA6P61647 398 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 SLC6A3Q01959 620 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 TAF3Q5VWG9 929 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 TMEM215Q68D42 235 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 MBLAC2Q68D91 279 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 RNF43Q68DV7 783 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 OLFML1Q6UWY5 402 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 SLC26A9Q7LBE3 791 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 SYT12Q8IV01 421 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 LGI2Q8N0V4 545 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 FRMD1Q8N878 549 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 FIBINQ8TAL6 211 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 PRCCQ92733 491 aaPredicted RBP18.08■□□□□ 0.48
SEC13-218ENST00000490283 SIPA1Q96FS4 1042 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 PRICKLE1Q96MT3 831 aaPredicted RBP18.08■□□□□ 0.48
SEC13-218ENST00000490283 SPAG5Q96R06 1193 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 EDEM2Q9BV94 578 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 NAA15Q9BXJ9 866 aaKnown RBP18.08■□□□□ 0.48
SEC13-218ENST00000490283 NAT10Q9H0A0 1025 aaKnown RBP18.08■□□□□ 0.48
SEC13-218ENST00000490283 FAM207AQ9NSI2 230 aaPredicted RBP18.08■□□□□ 0.48
SEC13-218ENST00000490283 RRN3Q9NYV6 651 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 STAP1Q9ULZ2 295 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 MYO18AQ92614 2054 aaKnown RBP18.07■□□□□ 0.48
SEC13-218ENST00000490283 DCDC2BA2VCK2 349 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 KCNU1A8MYU2 1149 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 IGLV3-25P01717 112 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 TACR2P21452 398 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 PRKCHP24723 683 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 HOXD12P35452 270 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 PTGER3P43115 390 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 RPS24P62847 133 aaKnown RBP18.07■□□□□ 0.48
SEC13-218ENST00000490283 NME3Q13232 169 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 RABGAP1LQ5R372 815 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 TTC39BQ5VTQ0 682 aaPredicted RBP18.07■□□□□ 0.48
SEC13-218ENST00000490283 RAP1GAP2Q684P5 730 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 TCEAL6Q6IPX3 200 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 DPY19L2P1Q6NXN4 242 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 RABEPKQ7Z6M1 372 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 KIAA0907Q7Z7F0 614 aaPredicted RBP18.07■□□□□ 0.48
SEC13-218ENST00000490283 METTL3Q86U44 580 aaKnown RBP18.07■□□□□ 0.48
SEC13-218ENST00000490283 ADIPOR2Q86V24 386 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 ERICH1Q86X53 443 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 ZNF677Q86XU0 584 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 TMPRSS6Q8IU80 811 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
SEC13-218ENST00000490283 CYB5D2Q8WUJ1 264 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 TCEAL3Q969E4 200 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 C18orf8Q96DM3 657 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 NUSAP1Q9BXS6 441 aaKnown RBP18.07■□□□□ 0.48
SEC13-218ENST00000490283 SLC6A17Q9H1V8 727 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 FBRSQ9HAH7 460 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 PAXBP1Q9Y5B6 917 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 FRYLO94915 3013 aa18.07■□□□□ 0.48
SEC13-218ENST00000490283 LUC7L3O95232 432 aaKnown RBP18.06■□□□□ 0.48
SEC13-218ENST00000490283 ASLP04424 464 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 CD6P30203 668 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 CD70P32970 193 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 CDH5P33151 784 aaPredicted RBP18.06■□□□□ 0.48
SEC13-218ENST00000490283 NOS2P35228 1153 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 COPB1P53618 953 aaKnown RBP18.06■□□□□ 0.48
SEC13-218ENST00000490283 POLR2FP61218 127 aaKnown RBP18.06■□□□□ 0.48
SEC13-218ENST00000490283 SYCP2LQ5T4T6 812 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 STPG1Q5TH74 334 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 SND1Q7KZF4 910 aaKnown RBP eCLIP18.06■□□□□ 0.483e-11■■■□□ 16.6
SEC13-218ENST00000490283 CFAP52Q8N1V2 620 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 NEK11Q8NG66 645 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 OR2T3Q8NH03 318 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 FOXJ1Q92949 421 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 GANQ9H2C0 597 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 TMEM51Q9NW97 253 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 KIAA1522Q9P206 1035 aaPredicted RBP18.06■□□□□ 0.48
SEC13-218ENST00000490283 SUN2Q9UH99 717 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 RALGAPA1Q6GYQ0 2036 aa18.06■□□□□ 0.48
SEC13-218ENST00000490283 M0QYT0 321 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 GFPT2O94808 682 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 HLA-EP13747 358 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 KCNA4P22459 653 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 OXTRP30559 389 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 SCNN1AP37088 669 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 MATKP42679 507 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 OXCT1P55809 520 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 RNASE9P60153 205 aaKnown RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 PITX1P78337 314 aaPredicted RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 TYRO3Q06418 890 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 ZNF33AQ06730 810 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 LMAN2Q12907 356 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 TRIM61Q5EBN2 209 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 FAM102AQ5T9C2 384 aaPredicted RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 RNF219Q5W0B1 726 aaPredicted RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 NOP9Q86U38 636 aaKnown RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 DEFB119Q8N690 84 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 CEP76Q8TAP6 659 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 WFDC5Q8TCV5 224 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms