RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PFKFB3Q16875 520 aaPredicted RBP4.42□□□□□ -1.7
CD46-216ENST00000490278 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 TMEM119Q4V9L6 283 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 GLE1Q53GS7 698 aaKnown RBP4.42□□□□□ -1.7
CD46-216ENST00000490278 TMEM88Q6PEY1 159 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 SLC39A5Q6ZMH5 540 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 RD3Q7Z3Z2 195 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 ADGRG3Q86Y34 549 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 TMEM57Q8N5G2 664 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 SLC2A12Q8TD20 617 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 ZNF845Q96IR2 970 aaPredicted RBP4.42□□□□□ -1.7
CD46-216ENST00000490278 PIGSQ96S52 555 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 SENP7Q9BQF6 1050 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 PRDM16Q9HAZ2 1276 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 ARL8BQ9NVJ2 186 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 SAGE1Q9NXZ1 904 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 RRN3Q9NYV6 651 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 B3GNT3Q9Y2A9 372 aa4.42□□□□□ -1.7
CD46-216ENST00000490278 COPG1Q9Y678 874 aaKnown RBP4.42□□□□□ -1.7
CD46-216ENST00000490278 LINC01548A6NM66 108 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 C16orf96A6NNT2 1141 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 TISP43B9A030 160 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 PRRT4C9JH25 899 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 HNRNPRO43390 633 aaKnown RBP4.41□□□□□ -1.7
CD46-216ENST00000490278 CYP2A6P11509 494 aaPredicted RBP4.41□□□□□ -1.7
CD46-216ENST00000490278 IGFBP2P18065 325 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 RXRAP19793 462 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 MAPK9P45984 424 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 PCP4P48539 62 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 ZNF84P51523 738 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 TUBA4AP68366 448 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 NHLH1Q02575 133 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 PDCLQ13371 301 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 ZNF788Q6ZQV5 615 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 RASGRP2Q7LDG7 609 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 FSIP1Q8NA03 581 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 ADPRHL1Q8NDY3 354 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 SEMA6DQ8NFY4 1073 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 PNISRQ8TF01 805 aaKnown RBP4.41□□□□□ -1.7
CD46-216ENST00000490278 HASPINQ8TF76 798 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 CLEC4CQ8WTT0 213 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 ZG16BQ96DA0 208 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 ZNF764Q96H86 408 aaPredicted RBP4.41□□□□□ -1.7
CD46-216ENST00000490278 UBXN10Q96LJ8 280 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 TRIM2Q9C040 744 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 CHODLQ9H9P2 273 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 GTF2A1LQ9UNN4 478 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 DERAQ9Y315 318 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
CD46-216ENST00000490278 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 MANSC4A6NHS7 340 aaPredicted RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 SEPT4O43236 478 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 RNF8O76064 485 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 ENO1P06733 434 aaKnown RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 SLC37A1P57057 533 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 PROK1P58294 105 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 DMWDQ09019 674 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 SLC10A2Q12908 348 aaPredicted RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 FAM110CQ1W6H9 321 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 SYNE3Q6ZMZ3 975 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 PTF1AQ7RTS3 328 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 PRIMA1Q86XR5 153 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 PTGR2Q8N8N7 351 aaPredicted RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 CEP70Q8NHQ1 597 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 ZNF398Q8TD17 642 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 CELF1Q92879 486 aaKnown RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 ARRDC3Q96B67 414 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 KTI12Q96EK9 354 aaPredicted RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 P2RY11Q96G91 374 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 COG8Q96MW5 612 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 GPR78Q96P69 363 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 NPAS1Q99742 590 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 HTATIP2Q9BUP3 242 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 SFXN1Q9H9B4 322 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 PLEKHA2Q9HB19 425 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 PDE11AQ9HCR9 933 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 RIC8AQ9NPQ8 531 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 RASSF1Q9NS23 344 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 RCE1Q9Y256 329 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 LRRFIP2Q9Y608 721 aaKnown RBP4.4□□□□□ -1.71
CD46-216ENST00000490278 SPATA31A5Q5VU36 1347 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 SPATA31A7Q8IWB4 1347 aa4.4□□□□□ -1.71
CD46-216ENST00000490278 NCAM2O15394 837 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 PRKCGP05129 697 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 CKMT1AP12532 417 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 TACR3P29371 465 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 IDUAP35475 653 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 CTXN3Q4LDR2 81 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 LRRC24Q50LG9 513 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 KIAA1324Q6UXG2 1013 aaKnown RBP4.39□□□□□ -1.71
CD46-216ENST00000490278 ZNF813Q6ZN06 617 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 TFAP2DQ7Z6R9 452 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 RFX6Q8HWS3 928 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 ADGRF3Q8IZF5 1079 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 USP13Q92995 863 aaPredicted RBP4.39□□□□□ -1.71
CD46-216ENST00000490278 EFHD1Q9BUP0 239 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 NOD2Q9HC29 1040 aa4.39□□□□□ -1.71
CD46-216ENST00000490278 RRP7AQ9Y3A4 280 aaKnown RBP4.39□□□□□ -1.71
CD46-216ENST00000490278 STX16-NPEPL1H3BU86 382 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms