RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ARHGEF4Q9NR80 690 aa8.14□□□□□ -1.11
SSR1-210ENST00000489567 ARHGEF38Q9NXL2 777 aa8.14□□□□□ -1.11
SSR1-210ENST00000489567 RRN3Q9NYV6 651 aa8.14□□□□□ -1.11
SSR1-210ENST00000489567 DEC1Q9P2X7 70 aa8.14□□□□□ -1.11
SSR1-210ENST00000489567 MYO1AQ9UBC5 1043 aa8.14□□□□□ -1.11
SSR1-210ENST00000489567 CNOT8Q9UFF9 292 aaKnown RBP8.14□□□□□ -1.11
SSR1-210ENST00000489567 HS3ST4Q9Y661 456 aa8.14□□□□□ -1.11
SSR1-210ENST00000489567 A0A0A0MRY4 1105 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 SSU72P8A0A1W2PR75 194 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TMEM191CA6NGB0 347 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 NCAM2O15394 837 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 CCP110O43303 1012 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TBL1XO60907 577 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TPM1P09493 284 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 SLC2A3P11169 496 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TACR2P21452 398 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 GPD1P21695 349 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 SDC4P31431 198 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 RDXP35241 583 aaKnown RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 GRIA2P42262 883 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 GALCP54803 685 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 SEC13P55735 322 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 SLC18A3Q16572 532 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 GEN1Q17RS7 908 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 MPPE1Q53F39 396 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 DGKKQ5KSL6 1271 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TMEM215Q68D42 235 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 RNF43Q68DV7 783 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 FBXL22Q6P050 247 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 VPS36Q86VN1 386 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 CHSY1Q86X52 802 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 CIR1Q86X95 450 aaPredicted RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 ZNF683Q8IZ20 524 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 LGI2Q8N0V4 545 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 ARFGAP1Q8N6T3 406 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 ATP6V0D2Q8N8Y2 350 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TERB1Q8NA31 727 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 PRSS33Q8NF86 280 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 FAM172AQ8WUF8 416 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 IGSF8Q969P0 613 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 SIK2Q9H0K1 926 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 NHEJ1Q9H9Q4 299 aaPredicted RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 SPTLC3Q9NUV7 552 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 PARVAQ9NVD7 372 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 STIM2Q9P246 746 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TBC1D3BA6NDS4 549 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 F9P00740 461 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 CYBBP04839 570 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 APODP05090 189 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 HLA-FP30511 346 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 KIR2DL1P43626 348 aaPredicted RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 DGKGP49619 791 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 ZNF143P52747 638 aaPredicted RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 SATB1Q01826 763 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TCF15Q12870 199 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 AUHQ13825 339 aaKnown RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 LRRC32Q14392 662 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 C2orf27AQ580R0 203 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 FSCBQ5H9T9 825 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 BRMS1LQ5PSV4 323 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 DAB2IPQ5VWQ8 1189 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 GRAMD4Q6IC98 578 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 PPP1R2P3Q6NXS1 205 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 DCUN1D2Q6PH85 259 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 TSSK4Q6SA08 328 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 STRADAQ7RTN6 431 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 C1orf210Q8IVY1 113 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 CCDC185Q8N715 623 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 RPLP0P6Q8NHW5 317 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 USP33Q8TEY7 942 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 BTBD6Q96KE9 485 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 XPO6Q96QU8 1125 aaKnown RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 SPATA6Q9NWH7 488 aaPredicted RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 ZNHIT6Q9NWK9 470 aaKnown RBP8.13□□□□□ -1.11
SSR1-210ENST00000489567 VANGL2Q9ULK5 521 aa8.13□□□□□ -1.11
SSR1-210ENST00000489567 USP34Q70CQ2 3546 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.12□□□□□ -1.11
SSR1-210ENST00000489567 F5H5T6 163 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 FAM72CH0Y354 149 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 AKR1B10O60218 316 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 CYP1A2P05177 515 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 MYBL1P10243 752 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 COL9A1P20849 921 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 CD70P32970 193 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 ADRA1BP35368 520 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 TIE1P35590 1138 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 NUMBP49757 651 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
SSR1-210ENST00000489567 FBXO43Q4G163 708 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 C10orf76Q5T2E6 689 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 MPP7Q5T2T1 576 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 FAM72AQ5TYM5 149 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 EGFLAMQ63HQ2 1017 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 FAM72DQ6L9T8 149 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 SND1Q7KZF4 910 aaKnown RBP eCLIP8.12□□□□□ -1.117e-8■■■□□ 15.4
SSR1-210ENST00000489567 FAM72BQ86X60 149 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 CCDC33Q8N5R6 958 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 SPC24Q8NBT2 197 aa8.12□□□□□ -1.11
SSR1-210ENST00000489567 HJURPQ8NCD3 748 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms