RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 NDRG1Q92597 394 aaKnown RBP16.87■□□□□ 0.29
USP48-210ENST00000489108 LGMNQ99538 433 aa16.87■□□□□ 0.29
USP48-210ENST00000489108 BLZF1Q9H2G9 400 aa16.87■□□□□ 0.29
USP48-210ENST00000489108 APOBEC3GQ9HC16 384 aaKnown RBP16.87■□□□□ 0.29
USP48-210ENST00000489108 SCML1Q9UN30 329 aa16.87■□□□□ 0.29
USP48-210ENST00000489108 A0A1W2PP55 124 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 TLR4O00206 839 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 CD70P32970 193 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 PIK3CAP42336 1068 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 SGSHP51688 502 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 RHDQ02161 417 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 C8orf34Q49A92 452 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 ZNF394Q53GI3 561 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 C1orf220Q5T0J3 134 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 ARHGAP40Q5TG30 622 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 KDM7AQ6ZMT4 941 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 DCBLD1Q8N8Z6 715 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 FAM181AQ8N9Y4 354 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 IQUBQ8NA54 791 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 WFDC5Q8TCV5 224 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 RFFLQ8WZ73 363 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 WBP1Q96G27 269 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 MYO19Q96H55 970 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 CLMPQ9H6B4 373 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 CYP3A43Q9HB55 503 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 CPNE5Q9HCH3 593 aa16.86■□□□□ 0.29
USP48-210ENST00000489108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
USP48-210ENST00000489108 LRRC72A6NJI9 287 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 MID1O15344 667 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 SIN3BO75182 1162 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 RNASEH2AO75792 299 aaKnown RBP16.85■□□□□ 0.29
USP48-210ENST00000489108 RXRGP48443 463 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 NXPH1P58417 271 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 LY6DQ14210 128 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 RAB41Q5JT25 222 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 ADGRF1Q5T601 910 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 SFMBT2Q5VUG0 894 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 KANSL1Q7Z3B3 1105 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 PIGZQ86VD9 579 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 ZNF248Q8NDW4 579 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 OR2T34Q8NGX1 318 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 GOLGA5Q8TBA6 731 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 TMC2Q8TDI7 906 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 SERAC1Q96JX3 654 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 HEXIM2Q96MH2 286 aaKnown RBP16.85■□□□□ 0.29
USP48-210ENST00000489108 UBXN6Q9BZV1 441 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 SFMBT1Q9UHJ3 866 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 STOML2Q9UJZ1 356 aa16.85■□□□□ 0.29
USP48-210ENST00000489108 C10orf142B7Z368 130 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 B8ZZF3 427 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 IKBKBO14920 756 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 ARHGAP6O43182 974 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 RNASEH1O60930 286 aaKnown RBP16.84■□□□□ 0.29
USP48-210ENST00000489108 MT-CO3P00414 261 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 NEFLP07196 543 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 PDCP20941 246 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 ACP1P24666 158 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 CCR5P51681 352 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 ZNF445P59923 1031 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 KCNC4Q03721 635 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 SFSWAPQ12872 951 aaKnown RBP16.84■□□□□ 0.29
USP48-210ENST00000489108 CST6Q15828 149 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 SPATS2Q86XZ4 545 aaKnown RBP16.84■□□□□ 0.29
USP48-210ENST00000489108 SLC9A9Q8IVB4 645 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 MMAAQ8IVH4 418 aaKnown RBP16.84■□□□□ 0.29
USP48-210ENST00000489108 DHX40Q8IX18 779 aaKnown RBP16.84■□□□□ 0.29
USP48-210ENST00000489108 OMDQ99983 421 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 ERVMER34-1Q9H9K5 563 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 ADAMTS1Q9UHI8 967 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 HBS1LQ9Y450 684 aaKnown RBP16.84■□□□□ 0.29
USP48-210ENST00000489108 HECTD1Q9ULT8 2610 aa16.84■□□□□ 0.29
USP48-210ENST00000489108 PVALEFA0A1B0GWK0 134 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 TBL1XO60907 577 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 ZBED1O96006 694 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 SYT1P21579 422 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 SLC8A1P32418 973 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 TKTL1P51854 596 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 TMPRSS3P57727 454 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 ST8SIA6P61647 398 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 STK38Q15208 465 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 HNRNPA1L2Q32P51 320 aaKnown RBP16.83■□□□□ 0.28
USP48-210ENST00000489108 PROX2Q3B8N5 592 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 PKDCCQ504Y2 493 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 BROXQ5VW32 411 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 PM20D1Q6GTS8 502 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 RFWD3Q6PCD5 774 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 BHLHA9Q7RTU4 235 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 TTC17Q96AE7 1141 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 ULBP1Q9BZM6 244 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 PCDHB1Q9Y5F3 818 aa16.83■□□□□ 0.28
USP48-210ENST00000489108 GOLGA6L7A0A1B0GV03 622 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 C6P13671 934 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 NASPP49321 788 aaPredicted RBP16.82■□□□□ 0.28
USP48-210ENST00000489108 PCBP4P57723 403 aaKnown RBP16.82■□□□□ 0.28
USP48-210ENST00000489108 E2F1Q01094 437 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 CUL4BQ13620 913 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 SLC45A4Q5BKX6 768 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 C9orf64Q5T6V5 341 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms