RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 VWA3BQ502W6 1294 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 DCAF6Q58WW2 860 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 MS4A13Q5J8X5 152 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 SYCP2LQ5T4T6 812 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 FAM124AQ86V42 546 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 FAM114A1Q8IWE2 563 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 LGI2Q8N0V4 545 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 CARNMT1Q8N4J0 409 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 HJURPQ8NCD3 748 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 OR2T3Q8NH03 318 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 FIBINQ8TAL6 211 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 PPP1R13BQ96KQ4 1090 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 LMLNQ96KR4 655 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 CPXM1Q96SM3 734 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 TUBGCP2Q9BSJ2 902 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 TRIM62Q9BVG3 475 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 NUP62CLQ9H1M0 184 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 NDST4Q9H3R1 872 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 CAPN10Q9HC96 672 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 SYNJ2BP-COX16A0A087WUM0 186 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 PES1O00541 588 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 GRAP2O75791 330 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 APOEP02649 317 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 OXTRP30559 389 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 CLCN1P35523 988 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 KRT9P35527 623 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 ATXN3P54252 364 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 PLEKHG6Q3KR16 790 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 FSCBQ5H9T9 825 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 MIIPQ5JXC2 388 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 WDR45BQ5MNZ6 344 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 RAP1GAP2Q684P5 730 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 DPY19L2P1Q6NXN4 242 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 RABEPKQ7Z6M1 372 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 SLC47A2Q86VL8 602 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 DEFB106AQ8N104 65 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 FOXJ1Q92949 421 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 LHX5Q9H2C1 402 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 FAM204AQ9H8W3 233 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 PLCB1Q9NQ66 1216 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 PRSS16Q9NQE7 514 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 SAMSN1Q9NSI8 373 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 COX16Q9P0S2 106 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 DACH1Q9UI36 760 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 PCDHGC3Q9UN70 934 aa12.37□□□□□ -0.43
CCHCR1-215ENST00000488920 GON4LQ3T8J9 2241 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 MEI4A8MW99 385 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 H0Y626 953 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 ARHGAP33O14559 1287 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 IGLV3-19P01714 112 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 IGLV3-25P01717 112 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 ERBB2P04626 1255 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 GNSP15586 552 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 TACR2P21452 398 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 PMLP29590 882 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 ANP32AP39687 249 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 CSKP41240 450 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 CDK17Q00537 523 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 KCNMA1Q12791 1236 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 CDH18Q13634 790 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 KCNJ12Q14500 433 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 OR6B2Q6IFH4 312 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 C11orf57Q6ZUT1 292 aaPredicted RBP12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 FAM183BPQ6ZVS7 135 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 CHSY1Q86X52 802 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 CCDC117Q8IWD4 279 aaPredicted RBP12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 FAM71AQ8IYT1 594 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 C1orf131Q8NDD1 294 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 DEFB124Q8NES8 71 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 CADM4Q8NFZ8 388 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 RNF34Q969K3 372 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 TTC17Q96AE7 1141 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 BTN2A3PQ96KV6 586 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 SLC2A13Q96QE2 648 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 MIR1-1HGQ9H1L0 117 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 LMBRD1Q9NUN5 540 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 DDIT4Q9NX09 232 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 SUN2Q9UH99 717 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 INTS6Q9UL03 887 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-215ENST00000488920 FAM170AA1A519 330 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 METTL12A8MUP2 240 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 KCNU1A8MYU2 1149 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 LUC7L3O95232 432 aaKnown RBP12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 GLI1P08151 1106 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 CEACAM1P13688 526 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 CSRP1P21291 193 aaKnown RBP12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 CTSOP43234 321 aaPredicted RBP12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 NUMBP49757 651 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 ST8SIA6P61647 398 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 RPS14P62263 151 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms