RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 TBCBQ99426 244 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 TKTL2Q9H0I9 626 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 PIGVQ9NUD9 493 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 ABCB8Q9NUT2 735 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 PARVAQ9NVD7 372 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 GGA2Q9UJY4 613 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 TMEM59LQ9UK28 342 aa13.34□□□□□ -0.27
PHF1-210ENST00000488767 TMCO5BA8MYB1 307 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 AXIN1O15169 862 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 SYNCRIPO60506 623 aaKnown RBP13.33□□□□□ -0.28
PHF1-210ENST00000488767 MYBL1P10243 752 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 PABPC1P11940 636 aaKnown RBP13.33□□□□□ -0.28
PHF1-210ENST00000488767 GZMAP12544 262 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 TDGF1P13385 188 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 HNRNPLP14866 589 aaKnown RBP eCLIP13.33□□□□□ -0.28
PHF1-210ENST00000488767 POLR2EP19388 210 aaKnown RBP13.33□□□□□ -0.28
PHF1-210ENST00000488767 GPD1P21695 349 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 SLC6A4P31645 630 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 CXCR3P49682 368 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 ATP11AP98196 1134 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 GEN1Q17RS7 908 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 EGFLAMQ63HQ2 1017 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 NADSYN1Q6IA69 706 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 PGBD3Q8N328 593 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 EMC1Q8N766 993 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 FIBINQ8TAL6 211 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 RXFP2Q8WXD0 754 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 NELL1Q92832 810 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 PRICKLE1Q96MT3 831 aaPredicted RBP13.33□□□□□ -0.28
PHF1-210ENST00000488767 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 SIK2Q9H0K1 926 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 ELOVL2Q9NXB9 296 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 KIAA1522Q9P206 1035 aaPredicted RBP13.33□□□□□ -0.28
PHF1-210ENST00000488767 SCINQ9Y6U3 715 aa13.33□□□□□ -0.28
PHF1-210ENST00000488767 KIAA1549LQ6ZVL6 1849 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 A0A1B0GVM2 712 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 TCRBV21S2A2A0A5A6 115 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 TCAF2A6NFQ2 919 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 PRRT4C9JH25 899 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 SGK1O00141 431 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 GFRA3O60609 400 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 RTN2O75298 545 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 PAGE1O75459 146 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 LUC7L3O95232 432 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 GYPCP04921 128 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 HLA-FP30511 346 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 HNRNPH3P31942 346 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 CASP14P31944 242 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 PTPN9P43378 593 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 ST8SIA6P61647 398 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 RPS24P62847 133 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 SLC12A1Q13621 1099 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 AUHQ13825 339 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 BYSLQ13895 437 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 ARID5BQ14865 1188 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 CDO1Q16878 200 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 FNDC3BQ53EP0 1204 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 USP39Q53GS9 565 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 EMC10Q5UCC4 262 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 RNF219Q5W0B1 726 aaPredicted RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 ANO7Q6IWH7 933 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 SERPINA13PQ6UXR4 307 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 PRR23BQ6ZRT6 265 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 CHST9Q7L1S5 443 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 STRADAQ7RTN6 431 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 ZNF571Q7Z3V5 609 aaPredicted RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 C11orf74Q86VG3 221 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 SFTPA1Q8IWL2 248 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 DRC7Q8IY82 874 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 MCOLN2Q8IZK6 566 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 CFAP52Q8N1V2 620 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.32□□□□□ -0.28
PHF1-210ENST00000488767 SPACA7Q96KW9 195 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 MCEEQ96PE7 176 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 TRIM5Q9C035 493 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 MRPL47Q9HD33 250 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 C2orf42Q9NWW7 574 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 EBF1Q9UH73 591 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 XPO7Q9UIA9 1087 aaKnown RBP13.32□□□□□ -0.28
PHF1-210ENST00000488767 VANGL2Q9ULK5 521 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 HS3ST4Q9Y661 456 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 CACNA1IQ9P0X4 2223 aa13.32□□□□□ -0.28
PHF1-210ENST00000488767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 C2CD4BA6NLJ0 364 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 LILRB5O75023 590 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 CLDN11O75508 207 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 RPP40O75818 363 aaKnown RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 FTLP02792 175 aaPredicted RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 ASLP04424 464 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 SKILP12757 684 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 RRM1P23921 792 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 WASP42768 502 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 PXNP49023 591 aaPredicted RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 MRE11P49959 708 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 SGSHP51688 502 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms