RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CAMK2BQ13554 666 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 PKP1Q13835 747 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 HSCBQ8IWL3 235 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 TATDN2Q93075 761 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 SKA1Q96BD8 255 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 ACE2Q9BYF1 805 aaPredicted RBP19.83■□□□□ 0.77
GGPS1-206ENST00000488594 RSPH9Q9H1X1 276 aaPredicted RBP19.83■□□□□ 0.77
GGPS1-206ENST00000488594 FTSJ1Q9UET6 329 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 LAMA5O15230 3695 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 A0A087WV48 116 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 FAM237AA0A1B0GTK4 181 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 H0Y8X5 98 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 CETN3O15182 167 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 VILLO15195 856 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 C21orf59P57076 290 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 CUL2Q13617 745 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 NUGGCQ68CJ6 796 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 KIAA0895LQ68EN5 471 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 MSANTD2Q6P1R3 559 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 UNC45BQ8IWX7 931 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 SCUBE3Q8IX30 993 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 LRIG1Q96JA1 1093 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 SPATA32Q96LK8 384 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 KIAA1257Q9ULG3 409 aa19.83■□□□□ 0.76
GGPS1-206ENST00000488594 KCNK3O14649 394 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 MSI1O43347 362 aaKnown RBP19.82■□□□□ 0.76
GGPS1-206ENST00000488594 CD19P15391 556 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 NDUFA8P51970 172 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 ST8SIA6P61647 398 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 PIK3R6Q5UE93 754 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 LAYNQ6UX15 382 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 TMPRSS12Q86WS5 348 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 ZC3H3Q8IXZ2 948 aaKnown RBP19.82■□□□□ 0.76
GGPS1-206ENST00000488594 ORAI3Q9BRQ5 295 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 PABPC3Q9H361 631 aaKnown RBP19.82■□□□□ 0.76
GGPS1-206ENST00000488594 COQ4Q9Y3A0 265 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 PCDHGA1Q9Y5H4 931 aa19.82■□□□□ 0.76
GGPS1-206ENST00000488594 CABIN1Q9Y6J0 2220 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 MUC22E2RYF6 1773 aaPredicted RBP19.81■□□□□ 0.76
GGPS1-206ENST00000488594 A0A1W2PPC4 97 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 TBL1XO60907 577 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 RNASEH1O60930 286 aaKnown RBP19.81■□□□□ 0.76
GGPS1-206ENST00000488594 IGLV3-27P01718 113 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 IGHV4-34P06331 123 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 VDRP11473 427 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 CDK4P11802 303 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 CD70P32970 193 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 KRBA2Q6ZNG9 492 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 UBA3Q8TBC4 463 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 GANCQ8TET4 914 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 IRGQQ8WZA9 623 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 AZIN2Q96A70 460 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 KNL1Q8NG31 2342 aa19.81■□□□□ 0.76
GGPS1-206ENST00000488594 A0A1B0GTQ1 180 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 TYW5A2RUC4 315 aaKnown RBP19.8■□□□□ 0.76
GGPS1-206ENST00000488594 FAM149AA5PLN7 773 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 EIF4E1BA6NMX2 242 aaKnown RBP19.8■□□□□ 0.76
GGPS1-206ENST00000488594 O00370 1275 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 ASLP04424 464 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 SGSHP51688 502 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 DAOAP59103 153 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 KRT85P78386 507 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 ARID5BQ14865 1188 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 CBWD6Q4V339 395 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 CCDC157Q569K6 752 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 CBWD3Q5JTY5 395 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 KCNT1Q5JUK3 1230 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 CBWD5Q5RIA9 395 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 DHRS13Q6UX07 377 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 MARCH9Q86YJ5 346 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 MFN1Q8IWA4 741 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 KDM1BQ8NB78 822 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 FIBINQ8TAL6 211 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 TTC17Q96AE7 1141 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 EEF2KMTQ96G04 330 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 CCDC34Q96HJ3 373 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 DDX50Q9BQ39 737 aaKnown RBP19.8■□□□□ 0.76
GGPS1-206ENST00000488594 FBXL12Q9NXK8 326 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 NUMA1Q14980 2115 aa19.8■□□□□ 0.76
GGPS1-206ENST00000488594 URB1O60287 2271 aaKnown RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 ACSL4O60488 711 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 LCP1P13796 627 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 TBXAS1P24557 533 aaPredicted RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 IL9RQ01113 521 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 HNRNPA1L2Q32P51 320 aaKnown RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 PKDCCQ504Y2 493 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 FAM133BQ5BKY9 247 aaKnown RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 DCAF17Q5H9S7 520 aaPredicted RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 TCERG1LQ5VWI1 586 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 RFWD3Q6PCD5 774 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 HJURPQ8NCD3 748 aaPredicted RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 WFDC5Q8TCV5 224 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 ELF4Q99607 663 aaPredicted RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 FZD4Q9ULV1 537 aa19.79■□□□□ 0.76
GGPS1-206ENST00000488594 TPX2Q9ULW0 747 aaKnown RBP19.79■□□□□ 0.76
GGPS1-206ENST00000488594 CELSR3Q9NYQ7 3312 aa19.78■□□□□ 0.76
GGPS1-206ENST00000488594 FAM47DPA6NHR8 397 aa19.78■□□□□ 0.76
GGPS1-206ENST00000488594 LRRC72A6NJI9 287 aa19.78■□□□□ 0.76
GGPS1-206ENST00000488594 SLC16A3O15427 465 aaKnown RBP19.78■□□□□ 0.76
GGPS1-206ENST00000488594 YKT6O15498 198 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms