RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZC3H12AQ5D1E8 599 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 PEAR1Q5VY43 1037 aaPredicted RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 RAP1GAP2Q684P5 730 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 MMS22LQ6ZRQ5 1243 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 ENOSF1Q7L5Y1 443 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 MFN1Q8IWA4 741 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 AHI1Q8N157 1196 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 MLKLQ8NB16 471 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 HJURPQ8NCD3 748 aaPredicted RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 OR2T3Q8NH03 318 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 CEP76Q8TAP6 659 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 PRICKLE1Q96MT3 831 aaPredicted RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 CAPN10Q9HC96 672 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 EPG5Q9HCE0 2579 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 DNAJC12Q9UKB3 198 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 TLR6Q9Y2C9 796 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 PTPRBP23467 1997 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 TYW5A2RUC4 315 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 SART1O43290 800 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 TRUB2O95900 331 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 TOP3BO95985 862 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 APOEP02649 317 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 SERPINF2P08697 491 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 PMLP29590 882 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 DPP6P42658 865 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 RING1Q06587 406 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 MAN2A1Q16706 1144 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 PTPRNQ16849 979 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 DCAF6Q58WW2 860 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 FSCBQ5H9T9 825 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 SYCP2LQ5T4T6 812 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 DCAF12L1Q5VU92 463 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 OR6B2Q6IFH4 312 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 TMEM110Q86TL2 294 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 CHSY1Q86X52 802 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 LGI2Q8N0V4 545 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 DEFB106AQ8N104 65 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 HDDC3Q8N4P3 179 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 ZCCHC9Q8N567 271 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 WDTC1Q8N5D0 677 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 MINDY1Q8N5J2 469 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 C1orf131Q8NDD1 294 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 SNX19Q92543 992 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 FOXJ1Q92949 421 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC39A13Q96H72 371 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 CPXM1Q96SM3 734 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 DDX50Q9BQ39 737 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 TMEM245Q9H330 911 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 FAM204AQ9H8W3 233 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 POPDC2Q9HBU9 364 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 SIX2Q9NPC8 291 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 USP36Q9P275 1121 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 ANGPTL2Q9UKU9 493 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 INTS6Q9UL03 887 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 TRPM6Q9BX84 2022 aa11.72□□□□□ -0.53
NIPAL3-207ENST00000488155 PLXNB3Q9ULL4 1909 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 H0Y626 953 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 FOXN3O00409 490 aaPredicted RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 ARHGAP33O14559 1287 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 IRAK2O43187 625 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 OPHN1O60890 802 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 ATP5BP06576 529 aaKnown RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 DLDP09622 509 aaKnown RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 SPINK2P20155 84 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 TACR2P21452 398 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 OXTRP30559 389 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 HOXD12P35452 270 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 CSKP41240 450 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 CTSOP43234 321 aaPredicted RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 YWHAZP63104 245 aaKnown RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 PTK2Q05397 1052 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 CAMK2GQ13555 558 aaPredicted RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 CDH18Q13634 790 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 E2F5Q15329 346 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 MS4A13Q5J8X5 152 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 WDR45BQ5MNZ6 344 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 FAM183BPQ6ZVS7 135 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 KIAA0907Q7Z7F0 614 aaPredicted RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 METTL3Q86U44 580 aaKnown RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC47A2Q86VL8 602 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 CIR1Q86X95 450 aaPredicted RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 CCDC117Q8IWD4 279 aaPredicted RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 FIBINQ8TAL6 211 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 STK32AQ8WU08 396 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 SHC3Q92529 594 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 RNF34Q969K3 372 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 AZIN2Q96A70 460 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 LMLNQ96KR4 655 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 NUP58Q9BVL2 599 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 LHX5Q9H2C1 402 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 THAP9Q9H5L6 903 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 PRSS16Q9NQE7 514 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 SAMSN1Q9NSI8 373 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms