RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 MYO7AQ13402 2215 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 IGLV3-10A0A075B6K4 115 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 DRGXA6NNA5 263 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 NCAM2O15394 837 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 CREB3O43889 395 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 ECI2O75521 394 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 LRIG2O94898 1065 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 TCF4P15884 667 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 RHOQP17081 205 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 EPHB2P29323 1055 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 HOXC13P31276 330 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 GBP2P32456 591 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-242ENST00000488013 USP4Q13107 963 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 SEMA3BQ13214 749 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 DPYSL3Q14195 570 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 PDGFRLQ15198 375 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 ZNF77Q15935 545 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 LEXMQ3ZCV2 418 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 C5orf22Q49AR2 442 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 MS4A13Q5J8X5 152 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 FAM78AQ5JUQ0 283 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 STXBP5Q5T5C0 1151 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 DAB2IPQ5VWQ8 1189 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 TXNRD3NBQ6F5E7 133 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 Q7L0L9 218 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 CHST9Q7L1S5 443 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 CHSY1Q86X52 802 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 SLC13A5Q86YT5 568 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-242ENST00000488013 LRRC49Q8IUZ0 686 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 FAM217AQ8IXS0 508 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 HJURPQ8NCD3 748 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-242ENST00000488013 BPIFB1Q8TDL5 484 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 ING5Q8WYH8 240 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 TSC1Q92574 1164 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 ELSPBP1Q96BH3 223 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 RUNDC3BQ96NL0 473 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 RNF157Q96PX1 679 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 PRMT1Q99873 361 aaKnown RBP11.4□□□□□ -0.58
HDLBP-242ENST00000488013 FERMT1Q9BQL6 677 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 ZYG11BQ9C0D3 744 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 BRD8Q9H0E9 1235 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 SIK2Q9H0K1 926 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 SCUBE2Q9NQ36 999 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 FEZ2Q9UHY8 353 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-242ENST00000488013 HS3ST4Q9Y661 456 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 PTPRDP23468 1912 aa11.4□□□□□ -0.58
HDLBP-242ENST00000488013 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.59
HDLBP-242ENST00000488013 hCG_1818297A0A087WSY0 165 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 C3orf70A6NLC5 250 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 WASH4PA8MWX3 477 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 E9PAM4 449 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 APOL1O14791 398 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 SRGAP2O75044 1071 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 CLDN11O75508 207 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 FGGP02679 453 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 KLKB1P03952 638 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 IRF1P10914 325 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 MX2P20592 715 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 TACR2P21452 398 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 TGM2P21980 687 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 ETFBP38117 255 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 MAPKAPK2P49137 400 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 CDH4P55283 916 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 LONRF2Q1L5Z9 754 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 ATP13A4Q4VNC1 1196 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 MPPE1Q53F39 396 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 ANKRD20A8PQ5CZ79 823 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 C6orf118Q5T5N4 469 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 PIK3R6Q5UE93 754 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 MANEALQ5VSG8 457 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 RWDD4Q6NW29 188 aaKnown RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 FBXL22Q6P050 247 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 TMCO3Q6UWJ1 677 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 MFSD7Q6UXD7 560 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF783Q6ZMS7 281 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 BBS12Q6ZW61 710 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 RFX6Q8HWS3 928 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 YAF2Q8IY57 180 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 TDRD5Q8NAT2 981 aaKnown RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 OSCP1Q8WVF1 389 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 HAUS1Q96CS2 278 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 TMA16Q96EY4 203 aaKnown RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 ZSWIM3Q96MP5 696 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 RPRD1AQ96P16 312 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 PSMB7Q99436 277 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 POMKQ9H5K3 350 aa11.39□□□□□ -0.59
HDLBP-242ENST00000488013 CWC15Q9P013 229 aaKnown RBP11.39□□□□□ -0.59
HDLBP-242ENST00000488013 GBF1Q92538 1859 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 A0A1B0GVM2 712 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 TCAF2A6NFQ2 919 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 H3BQ06 376 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-242ENST00000488013 CCDC188H7C350 402 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 APOC4-APOC2K7ER74 178 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 MBTPS2O43462 519 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms