RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 KCNN1Q92952 543 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 MYEOVQ96EZ4 313 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 TCTN2Q96GX1 697 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 PPP1R13BQ96KQ4 1090 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 FAM213AQ9BRX8 229 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 FOXP3Q9BZS1 431 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 RSPH9Q9H1X1 276 aaPredicted RBP6.13□□□□□ -1.43
COL4A3-206ENST00000487633 C17orf75Q9HAS0 396 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 ZSWIM6Q9HCJ5 1215 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 FZD3Q9NPG1 666 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 CYLDQ9NQC7 956 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 TMPRSS4Q9NRS4 437 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 AGO1Q9UL18 857 aaKnown RBP6.13□□□□□ -1.43
COL4A3-206ENST00000487633 PNMA8BQ9ULN7 279 aaPredicted RBP6.13□□□□□ -1.43
COL4A3-206ENST00000487633 DNM3Q9UQ16 869 aa6.13□□□□□ -1.43
COL4A3-206ENST00000487633 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 A0A1W2PQH9 124 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 TTC34A8MYJ7 566 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 HHLA1C9JL84 531 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 YKT6O15498 198 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 LATO43561 262 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 DUX1O43812 170 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 CD2BP2O95400 341 aaKnown RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 ITGA2BP08514 1039 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 PLA2G4BP0C869 781 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 MTORP42345 2549 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 TUBP50607 506 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 SMTNP53814 917 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 CLDN2P57739 230 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 ASIC1P78348 528 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 GTF2BQ00403 316 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 ZNF177Q13360 481 aaPredicted RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 DHX8Q14562 1220 aaKnown RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 HAUS3Q68CZ6 603 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 NAPEPLDQ6IQ20 393 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 XKR5Q6UX68 686 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 NYAP1Q6ZVC0 841 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 KIAA0907Q7Z7F0 614 aaPredicted RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 C14orf80Q86SX3 495 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 FAM35AQ86V20 835 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 DTX1Q86Y01 620 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 JAMLQ86YT9 394 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 DENND1CQ8IV53 801 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 BRSK2Q8IWQ3 736 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 LRRC52Q8N7C0 313 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 MFSD2AQ8NA29 543 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 NSUN7Q8NE18 718 aaKnown RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 OR6B3Q8NGW1 331 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 OR2T34Q8NGX1 318 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 OR14C36Q8NHC7 312 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 WDR36Q8NI36 951 aaKnown RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 JAKMIP2Q96AA8 810 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 CCDC97Q96F63 343 aaPredicted RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 MRGPRX3Q96LB0 322 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 FAM129BQ96TA1 746 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 NACA2Q9H009 215 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 ABCG4Q9H172 646 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 SDCBP2Q9H190 292 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 TCEAL2Q9H3H9 227 aaPredicted RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 PREBQ9HCU5 417 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 ABCB8Q9NUT2 735 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 DAXXQ9UER7 740 aaPredicted RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 HMGXB4Q9UGU5 601 aa6.12□□□□□ -1.43
COL4A3-206ENST00000487633 INTS6Q9UL03 887 aaKnown RBP6.12□□□□□ -1.43
COL4A3-206ENST00000487633 TRPM6Q9BX84 2022 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 PCSK5Q92824 1860 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 C9orf172C9J069 976 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 MUSKO15146 869 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 PFKFB2O60825 505 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 PDGFAP04085 211 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 GP1BAP07359 652 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 LIPCP11150 499 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 CCDC130P13994 396 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 PRLRP16471 622 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 CORO1AP31146 461 aaKnown RBP6.11□□□□□ -1.43
COL4A3-206ENST00000487633 SLC8A1P32418 973 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 ATP5C1P36542 298 aaKnown RBP6.11□□□□□ -1.43
COL4A3-206ENST00000487633 GNL1P36915 607 aaPredicted RBP6.11□□□□□ -1.43
COL4A3-206ENST00000487633 PNPLA4P41247 253 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 PSMD8P48556 350 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 CCR5P51681 352 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 ZNF131P52739 623 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 OXCT1P55809 520 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 KCNMA1Q12791 1236 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 CST6Q15828 149 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 KYAT1Q16773 422 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 TTC38Q5R3I4 469 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 MANEAQ5SRI9 462 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 C9orf64Q5T6V5 341 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 ATP1A1-AS1Q5TC04 95 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 FHL5Q5TD97 284 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 MBLAC2Q68D91 279 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 ZNF776Q68DI1 518 aaPredicted RBP6.11□□□□□ -1.43
COL4A3-206ENST00000487633 OR6B2Q6IFH4 312 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 RBM44Q6ZP01 1051 aaKnown RBP6.11□□□□□ -1.43
COL4A3-206ENST00000487633 MMS22LQ6ZRQ5 1243 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 USP30Q70CQ3 517 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 ZC3H18Q86VM9 953 aaKnown RBP6.11□□□□□ -1.43
COL4A3-206ENST00000487633 FUKQ8N0W3 1084 aa6.11□□□□□ -1.43
COL4A3-206ENST00000487633 ARL14Q8N4G2 192 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms