RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TARDBPQ13148 414 aaKnown RBP eCLIP16■□□□□ 0.15
MCF2L-228ENST00000487354 INAVAQ3KP66 663 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
MCF2L-228ENST00000487354 HES3Q5TGS1 186 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 CEP135Q66GS9 1140 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 ZNF776Q68DI1 518 aaPredicted RBP16■□□□□ 0.15
MCF2L-228ENST00000487354 USP30Q70CQ3 517 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 MYEOVQ96EZ4 313 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 MRGPRX3Q96LB0 322 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 FCRL3Q96P31 734 aaPredicted RBP16■□□□□ 0.15
MCF2L-228ENST00000487354 ACE2Q9BYF1 805 aaPredicted RBP16■□□□□ 0.15
MCF2L-228ENST00000487354 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 PCDHA7Q9UN72 937 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 PLA2G4CQ9UP65 541 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 TRAF3IP3Q9Y228 551 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 HBS1LQ9Y450 684 aaKnown RBP16■□□□□ 0.15
MCF2L-228ENST00000487354 MYO18BQ8IUG5 2567 aa16■□□□□ 0.15
MCF2L-228ENST00000487354 DFNA5O60443 496 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 LATS1O95835 1130 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 ZBED1O96006 694 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 IGLV3-27P01718 113 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 EPHA8P29322 1005 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-228ENST00000487354 SLC6A4P31645 630 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 SEMG2Q02383 582 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 FAM133BQ5BKY9 247 aaKnown RBP15.99■□□□□ 0.15
MCF2L-228ENST00000487354 C6orf118Q5T5N4 469 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 ADGRF1Q5T601 910 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 SFMBT2Q5VUG0 894 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 NCEH1Q6PIU2 408 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 ADAT2Q7Z6V5 191 aaKnown RBP15.99■□□□□ 0.15
MCF2L-228ENST00000487354 ANKRD52Q8NB46 1076 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 ENGASEQ8NFI3 743 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 PAGE5Q96GU1 130 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 HEXIM2Q96MH2 286 aaKnown RBP15.99■□□□□ 0.15
MCF2L-228ENST00000487354 PRICKLE1Q96MT3 831 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-228ENST00000487354 IMPG2Q9BZV3 1241 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 NRSN2Q9GZP1 204 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 CISHQ9NSE2 258 aa15.99■□□□□ 0.15
MCF2L-228ENST00000487354 INTS6Q9UL03 887 aaKnown RBP15.99■□□□□ 0.15
MCF2L-228ENST00000487354 GOLGA6L7A0A1B0GV03 622 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 YJEFN3A6XGL0 299 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 E7ENQ6 273 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 SIN3BO75182 1162 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 GABBR2O75899 941 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 LDOC1O95751 146 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-228ENST00000487354 C1SP09871 688 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 JUPP14923 745 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 TRIM21P19474 475 aaKnown RBP15.98■□□□□ 0.15
MCF2L-228ENST00000487354 HNF1BP35680 557 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
MCF2L-228ENST00000487354 C21orf59P57076 290 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 ZNF445P59923 1031 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 NFIL3Q16649 462 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 RFWD3Q6PCD5 774 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 EID2Q8N6I1 236 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 LSM14AQ8ND56 463 aaKnown RBP15.98■□□□□ 0.15
MCF2L-228ENST00000487354 EDEM1Q92611 657 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 GOLGA1Q92805 767 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 TATDN2Q93075 761 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 TTC17Q96AE7 1141 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 TMA16Q96EY4 203 aaKnown RBP15.98■□□□□ 0.15
MCF2L-228ENST00000487354 TMEM176AQ96HP8 235 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 EXOC1Q9NV70 894 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 FBXL12Q9NXK8 326 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 ADAMTS1Q9UHI8 967 aa15.98■□□□□ 0.15
MCF2L-228ENST00000487354 A0A1W2PP55 124 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 XPO1O14980 1071 aaKnown RBP15.97■□□□□ 0.15
MCF2L-228ENST00000487354 MID1O15344 667 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 SLFN14P0C7P3 912 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 PDIA4P13667 645 aaKnown RBP15.97■□□□□ 0.15
MCF2L-228ENST00000487354 ENPEPQ07075 957 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 ADIGQ0VDE8 80 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 GOLGA7BQ2TAP0 167 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 HNRNPA1L2Q32P51 320 aaKnown RBP15.97■□□□□ 0.15
MCF2L-228ENST00000487354 C9orf64Q5T6V5 341 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 PIK3R6Q5UE93 754 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 BSPRYQ5W0U4 402 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 NADSYN1Q6IA69 706 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 ERICH1Q86X53 443 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 AADATQ8N5Z0 425 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 RFFLQ8WZ73 363 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 ZNF396Q96N95 335 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-228ENST00000487354 NEUROG2Q9H2A3 272 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 MMRN2Q9H8L6 949 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
MCF2L-228ENST00000487354 TMEM8AQ9HCN3 771 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 OLA1Q9NTK5 396 aaKnown RBP15.97■□□□□ 0.15
MCF2L-228ENST00000487354 FRMD4BQ9Y2L6 1034 aa15.97■□□□□ 0.15
MCF2L-228ENST00000487354 FAM47DPA6NHR8 397 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 BRINP1O60477 761 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 ITGAVP06756 1048 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 NR2F2P24468 414 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 CD38P28907 300 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 NXPH1P58417 271 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 PPP2CBP62714 309 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 PPP2CAP67775 309 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 TLE3Q04726 772 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 BNIP3Q12983 259 aa15.96■□□□□ 0.15
MCF2L-228ENST00000487354 ARID5BQ14865 1188 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms