RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 RHBDD1Q8TEB9 315 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 PTCD2Q8WV60 388 aaKnown RBP6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 KAT5Q92993 513 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 WBP2Q969T9 261 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 SPACA7Q96KW9 195 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 HSPA12BQ96MM6 686 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 CDK5RAP1Q96SZ6 601 aaKnown RBP6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 KLF16Q9BXK1 252 aaPredicted RBP6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 INTS2Q9H0H0 1204 aaKnown RBP6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 GAREM1Q9H706 876 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 NMUR1Q9HB89 426 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 SPHK2Q9NRA0 654 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 CLIC5Q9NZA1 410 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 BCCIPQ9P287 314 aaKnown RBP eCLIP6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 LSM7Q9UK45 103 aaKnown RBP6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 TSPAN16Q9UKR8 245 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 KIAA1257Q9ULG3 409 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 CACNA1DQ01668 2161 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 DNHD1Q96M86 4753 aa6.73□□□□□ -1.33
CTDSPL-208ENST00000486978 CREBBPQ92793 2442 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 CENPEQ02224 2701 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TCRBV21S2A2A0A5A6 115 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TULP2O00295 520 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 KCNK3O14649 394 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 MDM4O15151 490 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 AP5Z1O43299 807 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 GREM1O60565 184 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 ZBED1O96006 694 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 APODP05090 189 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 IL12RB1P42701 662 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PLA2G4AP47712 749 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TKTL1P51854 596 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 YWHAGP61981 247 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 GAD2Q05329 585 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 NUMA1Q14980 2115 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 STILQ15468 1287 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 CNGA2Q16280 664 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TPD52L1Q16890 204 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 HLA-BQ31612 363 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PREPLQ4J6C6 727 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PKDCCQ504Y2 493 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 BTBD8Q5XKL5 378 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PM20D1Q6GTS8 502 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 LCLAT1Q6UWP7 414 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 RRAGAQ7L523 313 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PRICKLE2Q7Z3G6 844 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 ERICH1Q86X53 443 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 MIB1Q86YT6 1006 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 ARHGEF19Q8IW93 802 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 SCML4Q8N228 414 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PGBD3Q8N328 593 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 GALNT15Q8N3T1 639 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 RBBP8NLQ8NC74 664 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 SNIP1Q8TAD8 396 aaKnown RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TFAP2BQ92481 460 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TSC1Q92574 1164 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 ZNF419Q96HQ0 510 aaPredicted RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 NAF1Q96HR8 494 aaKnown RBP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 MED15Q96RN5 788 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 PNKPQ96T60 521 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 ULBP1Q9BZM6 244 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 NUP62CLQ9H1M0 184 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 LRRC4Q9HBW1 653 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 CD248Q9HCU0 757 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 TM7SF3Q9NS93 570 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 WDR70Q9NW82 654 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 CALCOCO1Q9P1Z2 691 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 NUDT5Q9UKK9 219 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 CYP8B1Q9UNU6 501 aa6.72□□□□□ -1.33
CTDSPL-208ENST00000486978 CAPN8A6NHC0 703 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 M0QYV0 167 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 RNF225M0QZC1 329 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 TRIM24O15164 1050 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 RRP8O43159 456 aaKnown RBP6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 BRINP1O60477 761 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 STC2O76061 302 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 ALDH1A2O94788 518 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 KAT7O95251 611 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 GP1BBP13224 206 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 MYF5P13349 255 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 POU3F2P20265 443 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 BRD2P25440 801 aaKnown RBP6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 GRIA2P42262 883 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 DPP6P42658 865 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 WASP42768 502 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 MTIF2P46199 727 aaKnown RBP6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 ZNF132P52740 706 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 MRPS21P82921 87 aaKnown RBP6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 COG7P83436 770 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 KDSRQ06136 332 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 ADIGQ0VDE8 80 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 EFEMP1Q12805 493 aa6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 TARDBPQ13148 414 aaKnown RBP eCLIP6.71□□□□□ -1.34
CTDSPL-208ENST00000486978 ANO4Q32M45 955 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms