RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 IGSF9Q9P2J2 1179 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 NRP1O14786 923 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 ZNF189O75820 626 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 FYNP06241 537 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 MGAT1P26572 445 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 PSMB4P28070 264 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 ADRA1BP35368 520 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 SESN2P58004 480 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 DAOAP59103 153 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 TMPRSS15P98073 1019 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 BST1Q10588 318 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 NAB1Q13506 487 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 FSCN1Q16658 493 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 TAF2Q6P1X5 1199 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 NUDCD3Q8IVD9 361 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 ZNF567Q8N184 647 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 TMEM86AQ8N2M4 240 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 RNF169Q8NCN4 708 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM13CQ8NE31 585 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 CDKL2Q92772 493 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 NAT9Q9BTE0 207 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 SEPT10Q9P0V9 454 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 C9IYK1 514 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 CAPN9O14815 690 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 BIRC5O15392 142 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 ANP32DO95626 131 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 RARBP10826 455 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 MYL2P10916 166 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 EPHB2P29323 1055 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 LHX1P48742 406 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 GJA9P57773 515 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 CRADDP78560 199 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 ZBTB16Q05516 673 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 SCAPQ12770 1279 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 CHI3L2Q15782 390 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 TEX44Q53QW1 395 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM35AQ86V20 835 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 UNC5BQ8IZJ1 945 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 STKLD1Q8NE28 680 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 SLC7A14Q8TBB6 771 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 ACMSDQ8TDX5 336 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 PTCD3Q96EY7 689 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 SYT15Q9BQS2 421 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 CEP41Q9BYV8 373 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 CACNG4Q9UBN1 327 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 RAD54BQ9Y620 910 aa18.49■□□□□ 0.55
PDLIM7-207ENST00000486828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM237BA0A1B0GVD1 139 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 MEIS3P2A8K0S8 358 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 AP1G2O75843 785 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 BPGMP07738 259 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 CYP2B6P20813 491 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 MRPS6P82932 125 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 OCRLQ01968 901 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 IFRD2Q12894 506 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 SEMA3BQ13214 749 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 CRYMQ14894 314 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 TAF1CQ15572 869 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 ACCSLQ4AC99 568 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 STXBP5Q5T5C0 1151 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 PACS1Q6VY07 963 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 GSTCDQ8NEC7 633 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 SMOQ99835 787 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 WDR6Q9NNW5 1121 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 CNGB3Q9NQW8 809 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 FBXO6Q9NRD1 293 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 ARL8BQ9NVJ2 186 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 KCNK4Q9NYG8 393 aa18.48■□□□□ 0.55
PDLIM7-207ENST00000486828 YJEFN3A6XGL0 299 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 E7ENQ6 273 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM72CH0Y354 149 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 CCDC22O60826 627 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 IBSPP21815 317 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 MLH1P40692 756 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 KRT72Q14CN4 511 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 DBN1Q16643 649 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 RAB41Q5JT25 222 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM72AQ5TYM5 149 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 CES4AQ5XG92 561 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM91A1Q658Y4 838 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM72DQ6L9T8 149 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 KYAT3Q6YP21 454 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 PDZD4Q76G19 769 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM72BQ86X60 149 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 PGBD4Q96DM1 585 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 PGAP3Q96FM1 320 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 NSL1Q96IY1 281 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM105AQ9NUU6 356 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 PIH1D1Q9NWS0 290 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 SYBUQ9NX95 663 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 RPL26L1Q9UNX3 145 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 C15orf41Q9Y2V0 281 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 CDY2AQ9Y6F7 541 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 ZNF638Q14966 1978 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 M0QZ92 97 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 ERCC2P18074 760 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 MAP2K2P36507 400 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 HCAR3P49019 387 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 CDK18Q07002 472 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms