RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ABCB8Q9NUT2 735 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 STIM2Q9P246 746 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 GGA2Q9UJY4 613 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL1A1-207ENST00000486572 PAGE1O75459 146 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 HNRNPLP14866 589 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL1A1-207ENST00000486572 PDGFRAP16234 1089 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 SDC4P31431 198 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 CNR2P34972 360 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 RDXP35241 583 aaKnown RBP18.83■□□□□ 0.6
COL1A1-207ENST00000486572 MRE11P49959 708 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 CDH18Q13634 790 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 RABGAP1LQ5R372 815 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 TTC39BQ5VTQ0 682 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-207ENST00000486572 DNAJC24Q6P3W2 148 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 TMEM92Q6UXU6 159 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 BNIPLQ7Z465 357 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 CCDC117Q8IWD4 279 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-207ENST00000486572 MCOLN2Q8IZK6 566 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 CFAP52Q8N1V2 620 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 JOSD2Q8TAC2 188 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 WFDC5Q8TCV5 224 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 RXFP2Q8WXD0 754 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 CIPCQ9C0C6 399 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 TKTL2Q9H0I9 626 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 ARHGEF38Q9NXL2 777 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 TAS2R14Q9NYV8 317 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 EBF1Q9UH73 591 aa18.83■□□□□ 0.6
COL1A1-207ENST00000486572 LUC7L2Q9Y383 392 aaKnown RBP18.83■□□□□ 0.6
COL1A1-207ENST00000486572 PRR23AA6NEV1 266 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 C2CD4BA6NLJ0 364 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 NPC1O15118 1278 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 LUC7L3O95232 432 aaKnown RBP18.82■□□□□ 0.6
COL1A1-207ENST00000486572 GJB6O95452 261 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 ADCY5O95622 1261 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 LMNAP02545 664 aaKnown RBP18.82■□□□□ 0.6
COL1A1-207ENST00000486572 PABPC1P11940 636 aaKnown RBP18.82■□□□□ 0.6
COL1A1-207ENST00000486572 SKILP12757 684 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 HOXB2P14652 356 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 PTPN9P43378 593 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 ATP11AP98196 1134 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 E2F5Q15329 346 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 TDRD12Q587J7 1177 aaKnown RBP18.82■□□□□ 0.6
COL1A1-207ENST00000486572 SPECC1LQ69YQ0 1117 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 SDE2Q6IQ49 451 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 KIAA0907Q7Z7F0 614 aaPredicted RBP18.82■□□□□ 0.6
COL1A1-207ENST00000486572 AHI1Q8N157 1196 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 CARNMT1Q8N4J0 409 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 FIBINQ8TAL6 211 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 VCPIP1Q96JH7 1222 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 ACOX2Q99424 681 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 GABRG3Q99928 467 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 EPC1Q9H2F5 836 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 POLMQ9NP87 494 aaPredicted RBP18.82■□□□□ 0.6
COL1A1-207ENST00000486572 ELOVL2Q9NXB9 296 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 HS3ST4Q9Y661 456 aa18.82■□□□□ 0.6
COL1A1-207ENST00000486572 BZW2Q9Y6E2 419 aaKnown RBP18.82■□□□□ 0.6
COL1A1-207ENST00000486572 PIEZO1Q92508 2521 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 TCRBV5S1A1TA0A578 114 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ANKRD62A6NC57 917 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 SIGLEC16A6NMB1 481 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 TMCO5BA8MYB1 307 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 DDX3XO00571 662 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL1A1-207ENST00000486572 AXIN1O15169 862 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 TIMM44O43615 452 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ALDH1A2O94788 518 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ENDOD1O94919 500 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 GZMAP12544 262 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 RRM1P23921 792 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 CASP14P31944 242 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 CD70P32970 193 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 RFC1P35251 1148 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-207ENST00000486572 WASP42768 502 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ATXN1P54253 815 aaKnown RBP18.81■□□□□ 0.6
COL1A1-207ENST00000486572 AUHQ13825 339 aaKnown RBP18.81■□□□□ 0.6
COL1A1-207ENST00000486572 TRIM14Q14142 442 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 CCDC14Q49A88 953 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 HGSNATQ68CP4 663 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 TMEM215Q68D42 235 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ANO7Q6IWH7 933 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 FBXL22Q6P050 247 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 CHST9Q7L1S5 443 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ASCL5Q7RTU5 278 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ALYREFQ86V81 257 aaKnown RBP18.81■□□□□ 0.6
COL1A1-207ENST00000486572 RASSF3Q86WH2 238 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 FAM131BQ86XD5 332 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 RPRD1AQ96P16 312 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-207ENST00000486572 ANLNQ9NQW6 1124 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 CACNA2D2Q9NY47 1150 aa18.81■□□□□ 0.6
COL1A1-207ENST00000486572 THAP10Q9P2Z0 257 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-207ENST00000486572 A0A1B0GVM2 712 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 TCRBV21S2A2A0A5A6 115 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 TCAF2A6NFQ2 919 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 H0Y626 953 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 I6L893 689 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-207ENST00000486572 GFRA3O60609 400 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 SERPING1P05155 500 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 GPD1P21695 349 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 GGCXP38435 758 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 CDO1Q16878 200 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms