RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 DLDP09622 509 aaKnown RBP19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 SLC2A3P11169 496 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 CYP11B1P15538 503 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 POLR2EP19388 210 aaKnown RBP19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 CD70P32970 193 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 RPS24P62847 133 aaKnown RBP19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 IRX4P78413 519 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 SLC6A3Q01959 620 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 ZNF33AQ06730 810 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 PTPN20Q4JDL3 420 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 OLFML1Q6UWY5 402 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 FAM183BPQ6ZVS7 135 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 CCDC117Q8IWD4 279 aaPredicted RBP19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 DEFB119Q8N690 84 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 ATP6V0D2Q8N8Y2 350 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 TMEM35BQ8NCS4 154 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 CYB5D2Q8WUJ1 264 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 SIPA1Q96FS4 1042 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 EDEM2Q9BV94 578 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 VPS16Q9H269 839 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 PDCL3Q9H2J4 239 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 PLCB1Q9NQ66 1216 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 ANO10Q9NW15 660 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 PILRBQ9UKJ0 227 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 LNP1A1A4G5 178 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 KCNU1A8MYU2 1149 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 NDUFS2O75306 463 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 GRAP2O75791 330 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 HLA-EP13747 358 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 TACR2P21452 398 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 ITPKAP23677 461 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 CD6P30203 668 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 CDH5P33151 784 aaPredicted RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 HOXD12P35452 270 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 COPAP53621 1224 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 CAMK2GQ13555 558 aaPredicted RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 KRT31Q15323 416 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 PTPRNQ16849 979 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 FNDC3BQ53EP0 1204 aaKnown RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 PEAR1Q5VY43 1037 aaPredicted RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 ZDHHC17Q8IUH5 632 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 LGI2Q8N0V4 545 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 CFAP52Q8N1V2 620 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 CARNMT1Q8N4J0 409 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 ZNF397Q8NF99 534 aaPredicted RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 PRCCQ92733 491 aaPredicted RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 TTC17Q96AE7 1141 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 ZNF419Q96HQ0 510 aaPredicted RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 SYNCQ9H7C4 482 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 FAM204AQ9H8W3 233 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 CD93Q9NPY3 652 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 FANCLQ9NW38 375 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 USP36Q9P275 1121 aaKnown RBP19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 RALGAPA1Q6GYQ0 2036 aa19.07■□□□□ 0.64
PRPF40A-209ENST00000486100 TPM2P07951 284 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 ABCB4P21439 1286 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 CCR1P32246 355 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 LMAN2Q12907 356 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 TRIM61Q5EBN2 209 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 RAP1GAP2Q684P5 730 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 SLC23A3Q6PIS1 610 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 SLC26A9Q7LBE3 791 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 CHSY1Q86X52 802 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 SLC41A1Q8IVJ1 513 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 OR2T3Q8NH03 318 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 CEP76Q8TAP6 659 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 RNF34Q969K3 372 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 NUSAP1Q9BXS6 441 aaKnown RBP19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 DDIT4Q9NX09 232 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 WSB2Q9NYS7 404 aaPredicted RBP19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 SUN2Q9UH99 717 aa19.06■□□□□ 0.64
PRPF40A-209ENST00000486100 C4orf47A7E2U8 309 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 LUC7L3O95232 432 aaKnown RBP19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 MBD3O95983 291 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 ACADMP11310 421 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 OXTRP30559 389 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 NOS2P35228 1153 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 GABRB2P47870 512 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 TPMTP51580 245 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 CDH18Q13634 790 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 DUOXA1Q1HG43 343 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 FSCBQ5H9T9 825 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 PPM1JQ5JR12 505 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 FOXJ1Q92949 421 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 TOE1Q96GM8 510 aaKnown RBP19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 PRMT1Q99873 361 aaKnown RBP19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 GANQ9H2C0 597 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 RRN3Q9NYV6 651 aa19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 KIAA1522Q9P206 1035 aaPredicted RBP19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 INTS6Q9UL03 887 aaKnown RBP19.05■□□□□ 0.64
PRPF40A-209ENST00000486100 THADAQ6YHU6 1953 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 SYNJ2BP-COX16A0A087WUM0 186 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 F5H5T6 163 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 F8VZ95 297 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 H0Y626 953 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 CDX4O14627 284 aaPredicted RBP19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 DAB1O75553 588 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 IGLV3-19P01714 112 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 ASLP04424 464 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 C7P10643 843 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms