RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 XPO7Q9UIA9 1087 aaKnown RBP12.89□□□□□ -0.35
HMG20B-211ENST00000486028 CLEC4EQ9ULY5 219 aa12.89□□□□□ -0.35
HMG20B-211ENST00000486028 R4GN57 208 aa12.89□□□□□ -0.35
HMG20B-211ENST00000486028 PIEZO1Q92508 2521 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 ANTXRLA6NF34 631 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 TMCO5BA8MYB1 307 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 PRRT4C9JH25 899 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 PROB1E7EW31 1015 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 DDX3XO00571 662 aaKnown RBP eCLIP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 NPC1O15118 1278 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 PAGE1O75459 146 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 APBB3O95704 486 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 GYPCP04921 128 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 GZMAP12544 262 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 TFE3P19532 575 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 NTSR1P30989 418 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 SDC4P31431 198 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 RDXP35241 583 aaKnown RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 FNTBP49356 437 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 SGSHP51688 502 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 DGKEP52429 567 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 RPS24P62847 133 aaKnown RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 ATP11AP98196 1134 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 EIF4HQ15056 248 aaKnown RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 GEN1Q17RS7 908 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 ACBD5Q5T8D3 534 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 OTUD1Q5VV17 481 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 HEATR6Q6AI08 1181 aaKnown RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 TRNP1Q6NT89 227 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 LONP2Q86WA8 852 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 CFAP52Q8N1V2 620 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 FIBINQ8TAL6 211 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 WFIKKN2Q8TEU8 576 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 PRICKLE1Q96MT3 831 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 TKTL2Q9H0I9 626 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 POLR3BQ9NW08 1133 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 ELOVL2Q9NXB9 296 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 ARHGEF38Q9NXL2 777 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 TAS2R14Q9NYV8 317 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
HMG20B-211ENST00000486028 ZFHX2Q9C0A1 2572 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-211ENST00000486028 CCDC163A0A0D9SF12 145 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 SGK1O00141 431 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 RTN2O75298 545 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 ALDH1A2O94788 518 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 ENDOD1O94919 500 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 ADCY5O95622 1261 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 PABPC1P11940 636 aaKnown RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 HNRNPLP14866 589 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 RRM1P23921 792 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 CASP14P31944 242 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 PTPN9P43378 593 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 DMWDQ09019 674 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 AUHQ13825 339 aaKnown RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 CRY1Q16526 586 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 TSR1Q2NL82 804 aaKnown RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 TTC39BQ5VTQ0 682 aaPredicted RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 EGFLAMQ63HQ2 1017 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 RNF43Q68DV7 783 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 DCUN1D2Q6PH85 259 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 WDR5BQ86VZ2 330 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 MFN1Q8IWA4 741 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 DRC7Q8IY82 874 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 CHPFQ8IZ52 775 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 CARNMT1Q8N4J0 409 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 OR8K1Q8NGG5 319 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 JOSD2Q8TAC2 188 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 OLIG1Q8TAK6 271 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 UBE2Q2Q8WVN8 375 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 MYEOVQ96EZ4 313 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 TRIM11Q96F44 468 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 C1orf74Q96LT6 269 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 HHIPQ96QV1 700 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 PRMT1Q99873 361 aaKnown RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 CIPCQ9C0C6 399 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 SIK2Q9H0K1 926 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 POLMQ9NP87 494 aaPredicted RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 ABCB8Q9NUT2 735 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 PARVAQ9NVD7 372 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 HS3ST4Q9Y661 456 aa12.87□□□□□ -0.35
HMG20B-211ENST00000486028 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
HMG20B-211ENST00000486028 TCRBV5S1A1TA0A578 114 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 H0Y626 953 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 ZBTB24O43167 697 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms