RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
COL6A1-204ENST00000486023 MMS22LQ6ZRQ5 1243 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 BEND5Q7L4P6 421 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 PHLDB2Q86SQ0 1253 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 AHI1Q8N157 1196 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 ATP6V0D2Q8N8Y2 350 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 WFIKKN2Q8TEU8 576 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 CPA5Q8WXQ8 436 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 PRICKLE1Q96MT3 831 aaPredicted RBP18.3■□□□□ 0.52
COL6A1-204ENST00000486023 SPAG5Q96R06 1193 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 PRDM16Q9HAZ2 1276 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.3■□□□□ 0.52
COL6A1-204ENST00000486023 CEP250Q9BV73 2442 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 KIAA1549LQ6ZVL6 1849 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 PATE3B3GLJ2 98 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 GOLGA8SH3BPF8 625 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 M0QYT0 321 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 NDUFS2O75306 463 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 ZNF217O75362 1048 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 GLI1P08151 1106 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 MMEP08473 750 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 ABCB4P21439 1286 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 TACR2P21452 398 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 CCR1P32246 355 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 NNTQ13423 1086 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 ANO6Q4KMQ2 910 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 PLA2G2CQ5R387 149 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 OLFML1Q6UWY5 402 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 ADIPOR2Q86V24 386 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 CIR1Q86X95 450 aaPredicted RBP18.29■□□□□ 0.52
COL6A1-204ENST00000486023 TMPRSS6Q8IU80 811 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 NETO1Q8TDF5 533 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 BTN2A3PQ96KV6 586 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 SLC2A13Q96QE2 648 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 GANQ9H2C0 597 aa18.29■□□□□ 0.52
COL6A1-204ENST00000486023 IGHV1OR15-9A0A0B4J2B8 117 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 KCNU1A8MYU2 1149 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 F5H5T6 163 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 KHNYNO15037 678 aaKnown RBP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 NPC1O15118 1278 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 EPHB6O15197 1021 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 AP5Z1O43299 807 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 FOXD2O60548 495 aaPredicted RBP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 ATP5BP06576 529 aaKnown RBP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 ACADMP11310 421 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 LMAN2Q12907 356 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 E2F5Q15329 346 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 FSCBQ5H9T9 825 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 MPP7Q5T2T1 576 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 FAM102AQ5T9C2 384 aaPredicted RBP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 NAA35Q5VZE5 725 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 LYSMD4Q5XG99 296 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 IL31Q6EBC2 164 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 NEK11Q8NG66 645 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 FIBINQ8TAL6 211 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 SLC20A1Q8WUM9 679 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 PRCCQ92733 491 aaPredicted RBP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 C18orf8Q96DM3 657 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 SIPA1Q96FS4 1042 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 MKRN2Q9H000 416 aaKnown RBP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 SIK2Q9H0K1 926 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 CD248Q9HCU0 757 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 ASNSD1Q9NWL6 643 aa18.28■□□□□ 0.52
COL6A1-204ENST00000486023 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
COL6A1-204ENST00000486023 DAB1O75553 588 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 ATP1A3P13637 1013 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 ITPKAP23677 461 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 NOS2P35228 1153 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 SOX5P35711 763 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 GGCXP38435 758 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 SULT1E1P49888 294 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 RNF43Q68DV7 783 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 SLC36A4Q6YBV0 504 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 ERMP1Q7Z2K6 904 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 FAM124AQ86V42 546 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 RGL4Q8IZJ4 473 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 EPS8L1Q8TE68 723 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 DDX1Q92499 740 aaKnown RBP18.27■□□□□ 0.52
COL6A1-204ENST00000486023 RTKNQ9BST9 563 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 NAT10Q9H0A0 1025 aaKnown RBP18.27■□□□□ 0.52
COL6A1-204ENST00000486023 MTG2Q9H4K7 406 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 TMEM74BQ9NUR3 256 aa18.27■□□□□ 0.52
COL6A1-204ENST00000486023 MYO18AQ92614 2054 aaKnown RBP18.27■□□□□ 0.51
COL6A1-204ENST00000486023 LGALS16A8MUM7 142 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 LUC7L3O95232 432 aaKnown RBP18.26■□□□□ 0.51
COL6A1-204ENST00000486023 IGLV3-25P01717 112 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 DLDP09622 509 aaKnown RBP18.26■□□□□ 0.51
COL6A1-204ENST00000486023 SLC2A3P11169 496 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF18P17022 549 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 CSKP41240 450 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 STAT1P42224 750 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 ST8SIA6P61647 398 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 NCAPHQ15003 741 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 SLC26A9Q7LBE3 791 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 ZDHHC17Q8IUH5 632 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.26■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF557Q8N988 423 aaPredicted RBP18.26■□□□□ 0.51
COL6A1-204ENST00000486023 MSANTD4Q8NCY6 345 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 RPRD1AQ96P16 312 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms