RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 KIR2DL2P43627 348 aaPredicted RBP7.09□□□□□ -1.27
SMC4-217ENST00000485867 TUFMP49411 452 aaKnown RBP7.09□□□□□ -1.27
SMC4-217ENST00000485867 CDR1P51861 262 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 EFNA5P52803 228 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 PPP2R5AQ15172 486 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 TAF12Q16514 161 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 BBS9Q3SYG4 887 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 MGAT5BQ3V5L5 792 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 EOGTQ5NDL2 527 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 GALNT17Q6IS24 598 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 Q6ZUG5 572 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 GPR155Q7Z3F1 870 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 EFCAB13Q8IY85 973 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 TRIML1Q8N9V2 468 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 OR10T2Q8NGX3 314 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 SETD7Q8WTS6 366 aaKnown RBP7.09□□□□□ -1.27
SMC4-217ENST00000485867 MRPS31Q92665 395 aaKnown RBP7.09□□□□□ -1.27
SMC4-217ENST00000485867 ACAP3Q96P50 834 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 ACO2Q99798 780 aaKnown RBP7.09□□□□□ -1.27
SMC4-217ENST00000485867 PI4K2AQ9BTU6 479 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 SGPP1Q9BX95 441 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 NCOA5Q9HCD5 579 aaKnown RBP7.09□□□□□ -1.27
SMC4-217ENST00000485867 PTPRHQ9HD43 1115 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 ZDHHC4Q9NPG8 344 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 TEX15Q9BXT5 2789 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 NOTCH2Q04721 2471 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 MYH10P35580 1976 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 IGHV1OR15-9A0A0B4J2B8 117 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 PLK4O00444 970 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 NRDCO43847 1150 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 BAG4O95429 457 aaKnown RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 NFATC1O95644 943 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 ZNF883P0CG24 379 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 MCF2P10911 925 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 HLA-EP13747 358 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 GABRG2P18507 467 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 CYP11B2P19099 503 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 PROZP22891 400 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 PCBP3P57721 371 aaKnown RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 CCT2P78371 535 aaKnown RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 SCRN1Q12765 414 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 DMP1Q13316 513 aaPredicted RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 NUMA1Q14980 2115 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 SMAD1Q15797 465 aaKnown RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 SLC10A6Q3KNW5 377 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 SLC39A12Q504Y0 691 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 ARMCX5Q6P1M9 558 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 DSTYKQ6XUX3 929 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 FAM177A1Q8N128 213 aaPredicted RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 STKLD1Q8NE28 680 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 NXPE2Q96DL1 559 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 AIFM3Q96NN9 605 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 SLC22A12Q96S37 553 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 NAP1L4Q99733 375 aaKnown RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 CDC6Q99741 560 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 ZDHHC5Q9C0B5 715 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 LINC00597Q9H2U6 94 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 FAM124BQ9H5Z6 455 aaPredicted RBP7.08□□□□□ -1.28
SMC4-217ENST00000485867 TMEM206Q9H813 350 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 PRDM16Q9HAZ2 1276 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 IL21RQ9HBE5 538 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 CALCOCO1Q9P1Z2 691 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 SUSD2Q9UGT4 822 aa7.08□□□□□ -1.28
SMC4-217ENST00000485867 PHLPP2Q6ZVD8 1323 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 STK36Q9NRP7 1315 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 OR14I1A6ND48 311 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 B8ZZF3 427 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 K7ERI5 159 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 HRKO00198 91 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 DEXIO95424 95 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 PRAMEF1O95521 474 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 CYP17A1P05093 508 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 CKMP06732 381 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 HMGB1P09429 215 aaKnown RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 HAPLN1P10915 354 aaPredicted RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 HARSP12081 509 aaKnown RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 TCF3P15923 654 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 SSRP1Q08945 709 aaKnown RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 RAD51AP2Q09MP3 1159 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 KRT32Q14532 448 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 TAF1BQ53T94 588 aaPredicted RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 ADGRF1Q5T601 910 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 EMC10Q5UCC4 262 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 PIK3AP1Q6ZUJ8 805 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 SPPL2BQ8TCT7 592 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 SH3RF2Q8TEC5 729 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 ZNF419Q96HQ0 510 aaPredicted RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 IFT74Q96LB3 600 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 YTHDC1Q96MU7 727 aaKnown RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 CYP2S1Q96SQ9 504 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 TARS2Q9BW92 718 aaKnown RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 AGXT2Q9BYV1 514 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 SEMA4CQ9C0C4 833 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 ZCWPW1Q9H0M4 648 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 TTC12Q9H892 705 aaPredicted RBP7.07□□□□□ -1.28
SMC4-217ENST00000485867 POLD4Q9HCU8 107 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 CRTAC1Q9NQ79 661 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 TM7SF3Q9NS93 570 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 ADAMTS1Q9UHI8 967 aa7.07□□□□□ -1.28
SMC4-217ENST00000485867 PCDHA12Q9UN75 941 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms