RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 HINFPQ9BQA5 517 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TSGA10Q9BZW7 698 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TBC1D17Q9HA65 648 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 HEBP1Q9NRV9 189 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 PIGVQ9NUD9 493 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 SPTLC3Q9NUV7 552 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ARHGEF38Q9NXL2 777 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ANAPC7Q9UJX3 599 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 MYO15AQ9UKN7 3530 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 TBC1D3BA6NDS4 549 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 H0Y626 953 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 TRDMT1O14717 391 aaKnown RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 NPC1O15118 1278 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 ARHGAP6O43182 974 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 CLDN11O75508 207 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 LMNAP02545 664 aaKnown RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 CYP17A1P05093 508 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 TACR2P21452 398 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 FECHP22830 423 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 ADRA1BP35368 520 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 SLC1A1P43005 524 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 TNFRSF4P43489 277 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 RPL7AP62424 266 aaKnown RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 ZNF177Q13360 481 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 EIF4EBP2Q13542 120 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 SLC12A1Q13621 1099 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 CDH18Q13634 790 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 AUHQ13825 339 aaKnown RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 UBXN2BQ14CS0 331 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 PIK3R6Q5UE93 754 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 GRAMD4Q6IC98 578 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 TRMT11Q7Z4G4 463 aaKnown RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 MAP7D3Q8IWC1 876 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 LGI2Q8N0V4 545 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 JOSD2Q8TAC2 188 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 SLC35G2Q8TBE7 412 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 RFFLQ8WZ73 363 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 NTAN1Q96AB6 310 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 RPRD1AQ96P16 312 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 EPAS1Q99814 870 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 SIK2Q9H0K1 926 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 HPS4Q9NQG7 708 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 DNAJC17Q9NVM6 304 aaKnown RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 KIAA1522Q9P206 1035 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 OR12D3Q9UGF7 316 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 PLA2G4CQ9UP65 541 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 R4GN57 208 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 OBSL1O75147 1896 aa8.55□□□□□ -1.04
SF3A1-208ENST00000485618 ZFHX2Q9C0A1 2572 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-208ENST00000485618 A0A0A6YYK5 440 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 TCRBV5S1A1TA0A578 114 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 FAM170AA1A519 330 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 SCAMP3O14828 347 aaKnown RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 DAPK3O43293 454 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 CCP110O43303 1012 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 CACNG3O60359 315 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 GREM1O60565 184 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 TSPAN3O60637 253 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 TBL1XO60907 577 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 TULP3O75386 442 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 PAGE1O75459 146 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 KAT7O95251 611 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 PENKP01210 267 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 ATP5BP06576 529 aaKnown RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 DCNP07585 359 aaKnown RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 KRT7P08729 469 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 L1CAMP32004 1257 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 MAN1A1P33908 653 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 ETFBP38117 255 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 NNMTP40261 264 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 DGKGP49619 791 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 GALK1P51570 392 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 SCAPQ12770 1279 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 DMC1Q14565 340 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 EIF4HQ15056 248 aaKnown RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 HSF5Q4G112 596 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 MS4A13Q5J8X5 152 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 ZFYVE27Q5T4F4 411 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 C6orf118Q5T5N4 469 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 ERMARDQ5T6L9 678 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 RAP1GAP2Q684P5 730 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 ZC3H14Q6PJT7 736 aaKnown RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 FAM131BQ86XD5 332 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 LRRC8AQ8IWT6 810 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 KIAA2013Q8IYS2 634 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 NIPA2Q8N8Q9 360 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 TTC8Q8TAM2 541 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 WFIKKN2Q8TEU8 576 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 SEMA4AQ9H3S1 761 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 CATSPERBQ9H7T0 1116 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 ZWILCHQ9H900 591 aa8.54□□□□□ -1.04
SF3A1-208ENST00000485618 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
SF3A1-208ENST00000485618 NDRG2Q9UN36 371 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms