RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 MARCH5Q9NX47 278 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 C5AR2Q9P296 337 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 AKT3Q9Y243 479 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TCF20Q9UGU0 1960 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 H0YAE9 185 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 MEN1O00255 615 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CEP104O60308 925 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TUBB4AP04350 444 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 MCF2P10911 925 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 AKAP5P24588 427 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 GRM5P41594 1212 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 AARSP49588 968 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 HNMTP50135 292 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CCR9P51686 369 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CLCN4P51793 760 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 NCKAP1LP55160 1127 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ERVFC1P60507 584 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ZXDAP98168 799 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CD83Q01151 205 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ALDH6A1Q02252 535 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ENPEPQ07075 957 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 DRP2Q13474 957 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 UAP1L1Q3KQV9 507 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TMEM31Q5JXX7 168 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TTC38Q5R3I4 469 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 SLC2A7Q6PXP3 512 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 LINC00469Q8N7U9 141 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 SYT2Q8N9I0 419 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 AGBL5Q8NDL9 886 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 NOC3LQ8WTT2 800 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 PPP1R13LQ8WUF5 828 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 RFFLQ8WZ73 363 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ST8SIA4Q92187 359 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CCDC74BQ96LY2 380 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 MAGEB10Q96LZ2 347 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 GBP4Q96PP9 640 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 KLHL5Q96PQ7 755 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CRACR2AQ9BSW2 395 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 HGH1Q9BTY7 390 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 EMILIN2Q9BXX0 1053 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ACPTQ9BZG2 426 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CD244Q9BZW8 370 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TRIM7Q9C029 511 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CCSER1Q9C0I3 900 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 NT5C3AQ9H0P0 336 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 SFXN1Q9H9B4 322 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TRPV5Q9NQA5 729 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CPSF3Q9UKF6 684 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ARHGEF37A1IGU5 675 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 FAM234BA2RU67 622 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ANHXE9PGG2 379 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 H3BML4 177 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SGK1O00141 431 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 CBX4O00257 560 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ARHGAP6O43182 974 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TSC22D2O75157 780 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SEC24BO95487 1268 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 EPHX1P07099 455 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 RARGP13631 454 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 FGFR3P22607 806 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 HTR1BP28222 390 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 GDI1P31150 447 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 RPL9P32969 192 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 MSH2P43246 934 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 MAGEA9P43362 315 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 RABIFP47224 123 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 RNF144AP50876 292 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 DEUP1Q05D60 604 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 NCBP1Q09161 790 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 NR5A1Q13285 461 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TRPC3Q13507 836 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 PDCD1Q15116 288 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ATL3Q6DD88 541 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ZCCHC12Q6PEW1 402 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TMCO2Q7Z6W1 182 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ADGRD2Q7Z7M1 963 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TRIM74Q86UV6 250 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TRIM73Q86UV7 250 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 CD302Q8IX05 232 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 RNF152Q8N8N0 203 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 BEST2Q8NFU1 509 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 OR10H5Q8NGA6 315 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ASAP3Q8TDY4 903 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SGCDQ92629 289 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 MVB12AQ96EY5 273 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 BICD1Q96G01 975 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 C8orf76Q96K31 380 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 C7orf26Q96N11 449 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 PPP1R10Q96QC0 940 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 MMTAG2Q9BU76 263 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 COLEC11Q9BWP8 271 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 MMADHCQ9H3L0 296 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 NOL6Q9H6R4 1146 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 MINDY3Q9H8M7 445 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SEPT11Q9NVA2 429 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TUBD1Q9UJT1 453 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 KCNH3Q9ULD8 1083 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 HELZP42694 1942 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms