RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RSRC2Q7L4I2 434 aaKnown RBP11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 SPATS2Q86XZ4 545 aaKnown RBP11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 ZNF248Q8NDW4 579 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 RFFLQ8WZ73 363 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 GOLGA1Q92805 767 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 PLD4Q96BZ4 506 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 MYO19Q96H55 970 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 HIC2Q96JB3 615 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 NT5C1AQ9BXI3 368 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 NEUROG2Q9H2A3 272 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 SLC39A2Q9NP94 309 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 STRIP2Q9ULQ0 834 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 NCKAP1Q9Y2A7 1128 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 TLR4O00206 839 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 SDC3O75056 442 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 RNASEH2AO75792 299 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 HLA-DRAP01903 254 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 RPN1P04843 607 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 MPOP05164 745 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 PIK3CAP42336 1068 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 TMPRSS3P57727 454 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 RHDQ02161 417 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 KCNC4Q03721 635 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 ILKQ13418 452 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC39A14Q15043 492 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 CST6Q15828 149 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 KNOP1Q1ED39 458 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 PKDCCQ504Y2 493 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 CNNM4Q6P4Q7 775 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 BHLHA9Q7RTU4 235 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 DHX40Q8IX18 779 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 AHI1Q8N157 1196 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 CACTIN-AS1Q8N1I8 211 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 OR2T34Q8NGX1 318 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 TTC9Q92623 222 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 TAF4BQ92750 862 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 SKA1Q96BD8 255 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 DHX58Q96C10 678 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 TMA16Q96EY4 203 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 WBP1Q96G27 269 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 SERAC1Q96JX3 654 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 C7orf25Q9BPX7 421 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 LRRC27Q9C0I9 530 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 BLZF1Q9H2G9 400 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 CGNQ9P2M7 1197 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 SUN2Q9UH99 717 aa11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.33□□□□□ -0.6
SMARCC1-205ENST00000483847 NYNRINQ9P2P1 1898 aaKnown RBP11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 LRRC72A6NJI9 287 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 TRIM38O00635 465 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 YKT6O15498 198 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 SIGLEC6O43699 453 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 MT-CO3P00414 261 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 ATP5BP06576 529 aaKnown RBP11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 C6P13671 934 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 POLR2EP19388 210 aaKnown RBP11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 ACP1P24666 158 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 RXRGP48443 463 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 HARS2P49590 506 aaKnown RBP11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 PCBP4P57723 403 aaKnown RBP11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 PPP2CBP62714 309 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 PPP2CAP67775 309 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 RAB41Q5JT25 222 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 UNC13DQ70J99 1090 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 PIGZQ86VD9 579 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 MMAAQ8IVH4 418 aaKnown RBP11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 AADATQ8N5Z0 425 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 LMLNQ96KR4 655 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 MRGPRX3Q96LB0 322 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 CAAP1Q9H8G2 361 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 DMAC2Q9NW81 257 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 ADAMTS1Q9UHI8 967 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 SFMBT1Q9UHJ3 866 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 STOML2Q9UJZ1 356 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 SCML1Q9UN30 329 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 BOD1L1Q8NFC6 3051 aa11.32□□□□□ -0.6
SMARCC1-205ENST00000483847 FLNCQ14315 2725 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 GOLGA6L7A0A1B0GV03 622 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 TULP2O00295 520 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 MSI1O43347 362 aaKnown RBP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC28A2O43868 658 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 WISP1O95388 367 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 TRIM21P19474 475 aaKnown RBP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC8A1P32418 973 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 CCR5P51681 352 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 TKTL1P51854 596 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 ADPRHP54922 357 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 AMPD3Q01432 767 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 HNRNPA1L2Q32P51 320 aaKnown RBP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 C8orf34Q49A92 452 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 ADGRF1Q5T601 910 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 C9orf64Q5T6V5 341 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 BROXQ5VW32 411 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 RFWD3Q6PCD5 774 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 ARHGAP18Q8N392 663 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms