RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 KDM1BQ8NB78 822 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 LMLNQ96KR4 655 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 CLSTN2Q9H4D0 955 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 SLC32A1Q9H598 525 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 CD93Q9NPY3 652 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 ASNSD1Q9NWL6 643 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 SUN2Q9UH99 717 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 KCNJ18B7U540 433 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 E5RJQ4 531 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 APOEP02649 317 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 ASLP04424 464 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 POLR2EP19388 210 aaKnown RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 PON1P27169 355 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 ERCC5P28715 1186 aaPredicted RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 MTIF2P46199 727 aaKnown RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 SNX16P57768 344 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 MTA1Q13330 715 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 EIF4EBP2Q13542 120 aaPredicted RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 MAN2A1Q16706 1144 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 TPD52L1Q16890 204 aaPredicted RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 UAP1L1Q3KQV9 507 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 FNDC3BQ53EP0 1204 aaKnown RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 MS4A13Q5J8X5 152 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 CT47A1Q5JQC4 288 aaPredicted RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 TAC4Q86UU9 113 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 CREBRFQ8IUR6 639 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 CCDC117Q8IWD4 279 aaPredicted RBP20.59■□□□□ 0.89
HPS4-213ENST00000483631 RGL4Q8IZJ4 473 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 TTC17Q96AE7 1141 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 ERLEC1Q96DZ1 483 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 ZDHHC5Q9C0B5 715 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 LHX5Q9H2C1 402 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 DACH1Q9UI36 760 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 CYTH4Q9UIA0 394 aa20.59■□□□□ 0.89
HPS4-213ENST00000483631 GOLGA6L7A0A1B0GV03 622 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 OPHN1O60890 802 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 MAPK8P45983 427 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 PTK2Q05397 1052 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 SEMA3BQ13214 749 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 ARHGAP44Q17R89 818 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 SYPL2Q5VXT5 272 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 GJB7Q6PEY0 223 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 PIP4P1Q86T03 277 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 HDDC3Q8N4P3 179 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 WFDC5Q8TCV5 224 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 BTN2A3PQ96KV6 586 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 PRICKLE1Q96MT3 831 aaPredicted RBP20.58■□□□□ 0.89
HPS4-213ENST00000483631 NOX5Q96PH1 765 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 GPR174Q9BXC1 333 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 DNAAF2Q9NVR5 837 aaKnown RBP20.58■□□□□ 0.89
HPS4-213ENST00000483631 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.58■□□□□ 0.89
HPS4-213ENST00000483631 CEP295Q9C0D2 2601 aa20.58■□□□□ 0.89
HPS4-213ENST00000483631 NUMA1Q14980 2115 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 A0A1B0GTW7 788 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 METTL12A8MUP2 240 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 TRUB2O95900 331 aaKnown RBP20.57■□□□□ 0.88
HPS4-213ENST00000483631 SLC2A3P11169 496 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 HLA-EP13747 358 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 CD70P32970 193 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 ZNF252P-AS1Q0IIN9 211 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 SLC14A1Q13336 389 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 HNRNPDQ14103 355 aaKnown RBP20.57■□□□□ 0.88
HPS4-213ENST00000483631 ARID5BQ14865 1188 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 EFHC1Q5JVL4 640 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 CYB5D2Q8WUJ1 264 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 SLC12A6Q9UHW9 1150 aa20.57■□□□□ 0.88
HPS4-213ENST00000483631 MEI4A8MW99 385 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 GIPC1O14908 333 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 HSF2BPO75031 334 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 USP8P40818 1118 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 RPS24P62847 133 aaKnown RBP20.56■□□□□ 0.88
HPS4-213ENST00000483631 CDH18Q13634 790 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 PLEKHG6Q3KR16 790 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 MINDY1Q8N5J2 469 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 ATP6V0D2Q8N8Y2 350 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 PPP1R13BQ96KQ4 1090 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 SLC2A13Q96QE2 648 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 NUCKS1Q9H1E3 243 aaKnown RBP20.56■□□□□ 0.88
HPS4-213ENST00000483631 NDST4Q9H3R1 872 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 SIX2Q9NPC8 291 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 ACP6Q9NPH0 428 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 PRSS16Q9NQE7 514 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 TJP2Q9UDY2 1190 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 SCML1Q9UN30 329 aa20.56■□□□□ 0.88
HPS4-213ENST00000483631 LUC7L3O95232 432 aaKnown RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 MOCS3O95396 460 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 SRPRAP08240 638 aaKnown RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 BPIFB4P59827 614 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 ST8SIA6P61647 398 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 CDK17Q00537 523 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 SFSWAPQ12872 951 aaKnown RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 SLC12A1Q13621 1099 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 TTC31Q49AM3 519 aaPredicted RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 DCAF6Q58WW2 860 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 TTC39BQ5VTQ0 682 aaPredicted RBP20.55■□□□□ 0.88
HPS4-213ENST00000483631 DCAF12L1Q5VU92 463 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 CLEC17AQ6ZS10 378 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 WDTC1Q8N5D0 677 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 ADAM32Q8TC27 787 aa20.55■□□□□ 0.88
HPS4-213ENST00000483631 MYO19Q96H55 970 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms