RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZNF829Q3KNS6 432 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 FSCBQ5H9T9 825 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 CDC42EP5Q6NZY7 148 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ZBTB46Q86UZ6 589 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 UNC5BQ8IZJ1 945 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 NIPA2Q8N8Q9 360 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 DDHD1Q8NEL9 900 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ZSCAN18Q8TBC5 510 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 TRPC4APQ8TEL6 797 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ATP2A3Q93084 1043 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ATP6V1E2Q96A05 226 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF597Q96LX8 424 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 TJP2Q9UDY2 1190 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ITGB1BP2Q9UKP3 347 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 NUB1Q9Y5A7 615 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 GOLGA8QA0A0J9YX86 632 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 E2F8A0AVK6 867 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 GOLGA8OA6NCC3 632 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 GOLGA8NF8WBI6 632 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 CSPG5O95196 566 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 BMP10O95393 424 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 OXSR1O95747 527 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ENO3P13929 434 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF12P17014 697 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 TCN1P20061 433 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 CDH3P22223 829 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ADORA2AP29274 412 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 CACNB3P54284 484 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 TCP10Q12799 353 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ITGA7Q13683 1181 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 IKBKEQ14164 716 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 KRT80Q6KB66 452 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 EPGNQ6UW88 154 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF781Q8N8C0 355 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 KYQ8NBH2 561 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 KCTD6Q8NC69 237 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 DEPDC1BQ8WUY9 529 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 THAP11Q96EK4 314 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 SLC29A1Q99808 456 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 PNPLA3Q9NST1 481 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 CNOT11Q9UKZ1 510 aaKnown RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 TSC22D4Q9Y3Q8 395 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 J3QRK9 145 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 TPP1O14773 563 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 AMHP03971 560 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ALDOAP04075 364 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 INHBBP09529 407 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ITGB5P18084 799 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 UGT1A6P19224 532 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 UGT1A1P22309 533 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 UGT1A4P22310 534 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 NFKBIAP25963 317 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 UGT1A3P35503 534 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 UGT1A5P35504 534 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 EIF2B2P49770 351 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 RAB15P59190 212 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 TUBA4AP68366 448 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 TIFABQ6ZNK6 161 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 SP8Q8IXZ3 490 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 CERS5Q8N5B7 392 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 WDTC1Q8N5D0 677 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ADAM32Q8TC27 787 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 AGR3Q8TD06 166 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 FBXL8Q96CD0 374 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 RCN3Q96D15 328 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 PGBD4Q96DM1 585 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 PPP1R36Q96LQ0 422 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 CALN1Q9BXU9 219 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 KMT5AQ9NQR1 393 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 VPS45Q9NRW7 570 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 A0A1W2PPW3 197 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 H7C0C1 242 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 HNRNPDLO14979 420 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 BCAS2O75934 225 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 KRT7P08729 469 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 RALBP11234 206 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 QARSP47897 775 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ATP5OP48047 213 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 SMAD1Q15797 465 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ZBED5Q49AG3 693 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF394Q53GI3 561 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 RWDD4Q6NW29 188 aaKnown RBP12.11□□□□□ -0.47
VTI1A-205ENST00000483122 C16orf87Q6PH81 154 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 LYSMD3Q7Z3D4 306 aa12.11□□□□□ -0.47
VTI1A-205ENST00000483122 EMC1Q8N766 993 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms