RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 KCNU1A8MYU2 1149 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 F5H5T6 163 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 ATP5BP06576 529 aaKnown RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 MMEP08473 750 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 ZNF806P0C7X5 589 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 POLR2EP19388 210 aaKnown RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 NDUFV2P19404 249 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 TACR2P21452 398 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 SCNN1AP37088 669 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 MATKP42679 507 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 GABRB2P47870 512 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 JAM2P57087 298 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 RNASE9P60153 205 aaKnown RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 RPS24P62847 133 aaKnown RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 CDH18Q13634 790 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 ENPP2Q13822 863 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 FNDC3BQ53EP0 1204 aaKnown RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 FAM102AQ5T9C2 384 aaPredicted RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 RAP1GAP2Q684P5 730 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 TMEM215Q68D42 235 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 KIAA1324Q6UXG2 1013 aaKnown RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 SLC36A4Q6YBV0 504 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 CYP2U1Q7Z449 544 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 KIAA0907Q7Z7F0 614 aaPredicted RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 LGI2Q8N0V4 545 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 CARNMT1Q8N4J0 409 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 FIBINQ8TAL6 211 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 SORCS1Q8WY21 1168 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 ERLEC1Q96DZ1 483 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 PRICKLE1Q96MT3 831 aaPredicted RBP14.38□□□□□ -0.11
VARS-225ENST00000482996 ERGIC2Q96RQ1 377 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 CD248Q9HCU0 757 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 TMEM51Q9NW97 253 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.38□□□□□ -0.11
VARS-225ENST00000482996 STAP1Q9ULZ2 295 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 GON4LQ3T8J9 2241 aa14.38□□□□□ -0.11
VARS-225ENST00000482996 BCLAF3A2AJT9 711 aaKnown RBP14.37□□□□□ -0.11
VARS-225ENST00000482996 M0QYT0 321 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 EPHB6O15197 1021 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 CAVIN2O95810 425 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 EPHX1P07099 455 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 DLDP09622 509 aaKnown RBP14.37□□□□□ -0.11
VARS-225ENST00000482996 NOMO3P69849 1222 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 CDR2Q01850 454 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 NME3Q13232 169 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 EIF4EBP2Q13542 120 aaPredicted RBP14.37□□□□□ -0.11
VARS-225ENST00000482996 CCDC6Q16204 474 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 FUT11Q495W5 492 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 AASDHQ4L235 1098 aaPredicted RBP14.37□□□□□ -0.11
VARS-225ENST00000482996 SPDYCQ5MJ68 293 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 RABGAP1LQ5R372 815 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 PLA2G2CQ5R387 149 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 NAA35Q5VZE5 725 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 MBLAC2Q68D91 279 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 TRIM72Q6ZMU5 477 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 SND1Q7KZF4 910 aaKnown RBP eCLIP14.37□□□□□ -0.11
VARS-225ENST00000482996 ADIPOR2Q86V24 386 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 WFDC5Q8TCV5 224 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 CYB5D2Q8WUJ1 264 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 MRGPRX1Q96LB2 322 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 PRDM16Q9HAZ2 1276 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 DLL3Q9NYJ7 618 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 XPO7Q9UIA9 1087 aaKnown RBP14.37□□□□□ -0.11
VARS-225ENST00000482996 NOCTQ9UK39 431 aaKnown RBP14.37□□□□□ -0.11
VARS-225ENST00000482996 PAXBP1Q9Y5B6 917 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 CACNA1AO00555 2505 aa14.37□□□□□ -0.11
VARS-225ENST00000482996 THADAQ6YHU6 1953 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 H0Y626 953 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 GOLGA8SH3BPF8 625 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 AP5Z1O43299 807 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 LUC7L3O95232 432 aaKnown RBP14.36□□□□□ -0.11
VARS-225ENST00000482996 MOCS3O95396 460 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 ASLP04424 464 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 ATP1A3P13637 1013 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 PRKCHP24723 683 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 CD70P32970 193 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 DPP6P42658 865 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 ZNF165P49910 485 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 RPL6Q02878 288 aaKnown RBP14.36□□□□□ -0.11
VARS-225ENST00000482996 LMAN2Q12907 356 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 SF3A2Q15428 464 aaKnown RBP14.36□□□□□ -0.11
VARS-225ENST00000482996 NFKBIBQ15653 356 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 FILIP1LQ4L180 1135 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 TTC39BQ5VTQ0 682 aaPredicted RBP14.36□□□□□ -0.11
VARS-225ENST00000482996 XYLT1Q86Y38 959 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 TMEFF1Q8IYR6 380 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 CFAP52Q8N1V2 620 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 SLC20A1Q8WUM9 679 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 CPA5Q8WXQ8 436 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 HSD3B7Q9H2F3 369 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 KIAA1522Q9P206 1035 aaPredicted RBP14.36□□□□□ -0.11
VARS-225ENST00000482996 MBD1Q9UIS9 605 aaPredicted RBP14.36□□□□□ -0.11
VARS-225ENST00000482996 CYP8B1Q9UNU6 501 aa14.36□□□□□ -0.11
VARS-225ENST00000482996 IGHV1OR15-9A0A0B4J2B8 117 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.35□□□□□ -0.11
VARS-225ENST00000482996 F9P00740 461 aa14.35□□□□□ -0.11
VARS-225ENST00000482996 CCDC172P0C7W6 258 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms